Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4587 |
Symbol | |
ID | 5106898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 5035791 |
End bp | 5036840 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640505858 |
Product | cobalamin biosynthesis protein CobW |
Protein accession | YP_001190066 |
Protein GI | 146309601 |
COG category | [R] General function prediction only |
COG ID | [COG0523] Putative GTPases (G3E family) |
TIGRFAM ID | [TIGR02475] cobalamin biosynthesis protein CobW |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00207896 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCC TCGCCAAACT GCCAGTCACT ATCGTCACCG GTTTTCTCGG TGCCGGCAAA ACCACCCTGC TGCGCCTTCT GCTGGCCAAT GCCGGCGGTC GTCGTATCGC GGTGATCGTC AACGAGTTCG GCGAGTTGGG CATCGACGGC GAGATCCTCA AGCAGTGCTC CATCGGCTGC AGCGAGGAGG AGGCCAATGG TCGCGTCTTC GAGCTGGCCA ACGGCTGCCT GTGCTGCACC GTGCAGGAAG AATTCTTCCC GGTGATGCGC GAGCTGGTGG CACGCCGTGG CGACCTCGAC CATATCCTGA TCGAAACCAG CGGTCTGGCC CTGCCCAAGC CGCTGGTGCA GGCCTTCAAC TGGCCGGAAA TCCGCAACGC CTGCACGGTC GACGCGGTGA TCACCGTGGT CGACAGCCCG GCGGTGGCTG CCGGCACCTT CGCCGCCTTC CCCGATCAGG TGGACGAGCA GCGCAAGCTC GACCCCAACC TCGACCATGA GTCGCCGCTG CACGAGCTGT TCGCCGACCA GCTGGCCAGC GCCGACCTGG TCATCCTCAA CAAGGCCGAC CTGCTCGACG CCGAAGCCCT GGCGGCGGTG CGCGCCGAGG TGGCCGAGGA GCTGCCGCCA GCGGTCAAGG TGATCGAGGC CCATGGTGGT GATCTGCCCA TCAGCGTGTT GCTGGGCCTG AACAGTGAAA CCGAGCTGCA TATCGACAGC CGTCGCACCC ACCACGACGA TGAAGACGAA GACCACGATC ACGAAGAATT CGACTCGTTC CACGTGGAAC TACCGGAAAC CGAGGAGGCG CGCCTGCTGG CTGCGCTGAA GGATGCAGTG ACCAAGTACG GCATTCTGCG GGTCAAGGGC TTCGCCGCTA TCCCTGGCAA ACCCATGCGT CTGCTGGTGC AGGGTGTCGG TCAGCGCTTC GACCGCCACT TCGACCGCGC CTGGCAAGCC GACGAGCAGC GCATCAGCCG CCTGGTGGTG ATCGGCCAGC AGCTCGACCG TGCTGCCATC GAGGACGAGT TGAAGGCGGC GCTGGCCTGA
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Protein sequence | MKTLAKLPVT IVTGFLGAGK TTLLRLLLAN AGGRRIAVIV NEFGELGIDG EILKQCSIGC SEEEANGRVF ELANGCLCCT VQEEFFPVMR ELVARRGDLD HILIETSGLA LPKPLVQAFN WPEIRNACTV DAVITVVDSP AVAAGTFAAF PDQVDEQRKL DPNLDHESPL HELFADQLAS ADLVILNKAD LLDAEALAAV RAEVAEELPP AVKVIEAHGG DLPISVLLGL NSETELHIDS RRTHHDDEDE DHDHEEFDSF HVELPETEEA RLLAALKDAV TKYGILRVKG FAAIPGKPMR LLVQGVGQRF DRHFDRAWQA DEQRISRLVV IGQQLDRAAI EDELKAALA
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