| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4586 |
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| Symbol | cobN |
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| ID | 5106897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 5031953 |
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| End bp | 5035699 |
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| Gene Length | 3747 bp |
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| Protein Length | 1248 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505857 |
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| Product | cobaltochelatase subunit CobN |
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| Protein accession | YP_001190065 |
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| Protein GI | 146309600 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
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| TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.465963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTCC TACGCACCCA GCCCGGCGCC CAACTGCCGG CCGACAGCAT CGCCGACCTT
GGCCAGACGC CTGCCGAGCT GGTGATCCTG TGCACGGGGG ATTCGCACTT GTCGTTGTTG
GCCGAAGCCG CCCGGCAACT GCCGGATGAC TACCCCAGCC TGCGCCTGGC CAGCCCGGCG
CAACTGAGCA ATAACGCCTC GGTGGATTAT TACGTCGAGC AGGTGCTGCA GCATGCCAAG
GTCATTCTGA TTTCGGTGCA TGGTGGCGTC AGCTACTGGC GCTACGGCGT GGAGCGTCTG
GTGGAGCTGG GCGCGCGCGG CGCCACGGTG ATCATGGTGC CGGGTGATGA CAAGCCCGAC
CCGGAGTTGA ATGCCCTCGG CAACGTCAGC GAAGAGGACA GCCAGCGGCT CTGGCAGTAC
CTGCGGCAGG GCGGCTTGGA CAATGCCCGC CAGTTGTTCC GCTGCATCGG CAGCCGCTGG
TTAGGGCGAG ACGACACATG GCAGGAGCCG CAACCGCTGC CGCGCGTCGG TCTCTATCAC
CCACAACGCA GTCCTGCCCA GTTAGCCGAT TGGCGGGCGC AGTGGCAACC CGCCGCGCCT
GTGGTGGCGC TGTTGTTCTA CCGTAACCAC GTGCAATCGG CGAACACCGC GTTCGTCGAT
ACCTTCTGCG CGCACCTCGT TCGTCAGGGC CTCAACCCGC TGCCGATGGC CGTGGCCAGC
CTCAAGGAGC CGGCCTGCCT GGATCAGGTG CAGGCCTGGC TGGACGAAAC CAGCGCCGCG
TTGATCGTCA ATACCACTGG CTTCGCCCTG TCCAACCCCG AGGCGCCGCA GGCGAGGGTG
TTCCGTCGAG ATATTCCGGT GCTGCAGGCC ATCTGCTCGT TGGACAACCA GGCGCAGTGG
CAGGCCAGTG CTCAGGGTCT GGGCTCGCGC GACCTGGCCA TGCATGTGGT GCTGCCCGAG
CTGGATGGCC GGCTGATCGG TACCGCCATC AGCTTCAAAG GTCTGGCCTG GCGCAGCGAG
CGTAGCCAGA GCGATGTGGT GTGCTACCAG GCGCATGAAC CGGGTATGGC TTATGTCGCG
GAACTGGCGC GGAACTGGTG CCAGTTGGCG ATCAAAAGCA ACGATCAGAA GCGAATCGCG
CTGATTCTTG CCAACTACCC GACCCGCGAT GGGCGTATCG GCAATGGCGT CGGCCTGGAT
ACGCCGGCTG CCGCGCTGAA TATTCTCCGC GCGCTGCAGG CGCAGGGCTA TCCGGTGGAT
AACCTGCCGG ACAGCGGCAC TGCACTTGTC CACAGCCTGC TGGGTGGGGT CACCAACGAT
CTGGATGGCT TGGATACACG GCCATGTGCA CAGAGCCTGG CGCTGGACGA TTACCTGGGA
TTTTTCCACA GCCTGCCGCA GCAGAACCAG CAGGCGGTGC GCGAGCGCTG GGGCGAGCCG
CAGAACGACC CGATGTTCCG CAGCGGGCGG ATGATGGTCG CCGGCCTGCG CTTCGGCCTG
ACCTTCGTCG GCATCCAGCC GGCGCGTGGC TATCAGCTCG ACGCCGCAGC GGTGTACCAC
GACCCCGATC TGGTGCCGCC GCACGGCTAT ATCGCCTTCT ATGCCTGGCT GCGCACGGCG
TTCGCTGCCG ATGCGCTGAT CCACGTCGGC AAGCACGGCA ACCTGGAGTG GCTGCCGGGC
AAAAGCGTTG GCCTGTCCGA GGGCTGCTGG CCGCAGGCGC TGATCGGCCC GCTGCCGAAT
ATCTATCCCT TTATCGTCAA CGATCCGGGT GAGGGCGCGC AGGCCAAGCG CCGCACCCAG
GCGGTGATCA TCGACCACCT GATGCCGCCG CTGACCCGTG CCGAAAGCTA TGGCCCGCTA
CGCGATCTGG AGCGGCTGGC CGACGAGTAT TACGACGCCA GCCAGCTCGA CCAGCGCCGC
GCCGTTGAGC TGCGTGGCGA GATTCTGGCC AAGGTGCGCG AGGCCAGCCT CGACCGCGAG
CTGGGTCTGC AACTTAACGA TGACGGCGAC AGCTGGTTGC CGCAGCTCGA CGCCTACCTG
TGCGACCTCA AGGAGTCGCA GATCCGCGAT GGTCTGCATG TGTTCGGCGA GTCGCCGGCT
GGCCAGTTGC GTCGCGACAC CTTGCTGGCG CTGCTGCGTA TCCCCCGTGG CGATGGCCAG
GGCGCCAATG CCAGCTTGCT GCGCGCGCTG GCCCGTGGCC TGGAGCTGGG CCTCGATCCG
CTCGATTGCG ACATGGGCCA ACCCTGGGAT GGGGCGCGTC CACAGGCGCT GCAGGCTGTG
GATAACAGCC TGTGGCGTAC CTTCGGCGAT ACCCGCGAGC GTCTGGAACT GCTGGCGTTG
AGGCTGATCG AGCAGCGCCT GGCGGGGGTG ACCTGCGGCG ACTTCGGCGC CGAGGTGGCG
CTGATTCTCG ACGGCCTGGC CGAGCATATC GCGCCGCTGC TGGATGCCTG TGGCGACGCC
GAGATGGGCG GCCTGCTGGC GGCGCTGGAG GGACGTTTCG TGCCGGCTGG GCCAAGCGGT
GCGCCCAGTC GCGGGCGCCT CGACGTACTG CCCACCGGGC GCAACTTCTT TACTGTCGAC
GTGCGTCACC TGCCCACGCC CACCGCCTGG CGCCTCGGCG TGCAGGCGGC GGATCGCCTG
CTCGAACGAC ACCTGCAGGA CGAGGGCGAT CACCTGCGCC AACTCGGCCT GTCGGTATGG
GGCACGGCGA CCATGCGCAC CGGTGGCGAC GATATCGCCC AGGCACTGGC GCTGATGGGC
GTGCGCCCGG TGTGGCAGCC GGGCAGCCAG CGCGTCGAGC GTTTCGAGGT GCTGCCGCTG
GAACAGCTCG GTCGGCCACG GGTGGACGTC ACCCTGCGCG TCTCGGGCTT CTTCCGCGAT
GCCTTCAGCA ACCTGATTCG CCTGTTCGAC GAGGCCGTGC AGGCGGTGAT TGAGCTGGAC
GAACCGGAAG ATATGAACCC GCTGTCGGCG CGGGTCTGGC GCGAATCGCT GGCACTTAAG
GACGGCGGCC TGGATGAAGC CGAAGCGCGG CGGCAGGCCG GTTGGCGGGT GTTCGGCGCC
AAGCCGGGCG CCTATGGCGC CGGGGTGCAG AACGCCATCG AGGAACGCCT GTGGCAGAGC
CGTGCGGATC TCGCTGAGGT CTACCTCAAC TGGGGCGGTT ACGCCTACGG CAGCGGCGCC
GAGGGGCTGC CTGCGCGGCA GCGCTTCGTC GACCGCCTGG AGCAGATGCA GGCGGTGCTG
CACAACCAGG ACAACCGCGA GCACGACATC CTCGACTCCA ACGACTACTA CCAGTTCCAG
GGCGGCATGC TGGCGGCGGT GGAAACCCTG CGCGGGCTCA AGGTGGCCAG CTACTTCGGC
GACAACAGCC AGCCGGACAC GCCGCGCATC CGCAGCCTCA AGGAAGAACT CAATCGCGTG
GTACGTGCTC GCGCCGCCAA CCCCAAGTGG ATCGCGGGCA TGAAGCGCCA TGGCTACAAG
GGCGCCTTCG AACTGGCCGC GACCATCGAC TACCTGTTCG CCTTCGACGC CACCAGCGAA
CTGGTCGATG ACCACCAGTA CGCGCTGCTC ACCGATGCCT ACCTGCTCGA TAGGGATACC
CGCGACTTTA TTCAGCAACA CAACCCTGGC GCGCTCAACG ACATCCTCGA ACGCCTGCTG
GAAGCCCAGC AACGCGGCCT GTGGGAGAAT CCCGGTGAGT ACCGCGAGGC GCTGGAAAAC
CTGCTGCTCG ATAGCGAGGA GTCATGA
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| Protein sequence | MHLLRTQPGA QLPADSIADL GQTPAELVIL CTGDSHLSLL AEAARQLPDD YPSLRLASPA
QLSNNASVDY YVEQVLQHAK VILISVHGGV SYWRYGVERL VELGARGATV IMVPGDDKPD
PELNALGNVS EEDSQRLWQY LRQGGLDNAR QLFRCIGSRW LGRDDTWQEP QPLPRVGLYH
PQRSPAQLAD WRAQWQPAAP VVALLFYRNH VQSANTAFVD TFCAHLVRQG LNPLPMAVAS
LKEPACLDQV QAWLDETSAA LIVNTTGFAL SNPEAPQARV FRRDIPVLQA ICSLDNQAQW
QASAQGLGSR DLAMHVVLPE LDGRLIGTAI SFKGLAWRSE RSQSDVVCYQ AHEPGMAYVA
ELARNWCQLA IKSNDQKRIA LILANYPTRD GRIGNGVGLD TPAAALNILR ALQAQGYPVD
NLPDSGTALV HSLLGGVTND LDGLDTRPCA QSLALDDYLG FFHSLPQQNQ QAVRERWGEP
QNDPMFRSGR MMVAGLRFGL TFVGIQPARG YQLDAAAVYH DPDLVPPHGY IAFYAWLRTA
FAADALIHVG KHGNLEWLPG KSVGLSEGCW PQALIGPLPN IYPFIVNDPG EGAQAKRRTQ
AVIIDHLMPP LTRAESYGPL RDLERLADEY YDASQLDQRR AVELRGEILA KVREASLDRE
LGLQLNDDGD SWLPQLDAYL CDLKESQIRD GLHVFGESPA GQLRRDTLLA LLRIPRGDGQ
GANASLLRAL ARGLELGLDP LDCDMGQPWD GARPQALQAV DNSLWRTFGD TRERLELLAL
RLIEQRLAGV TCGDFGAEVA LILDGLAEHI APLLDACGDA EMGGLLAALE GRFVPAGPSG
APSRGRLDVL PTGRNFFTVD VRHLPTPTAW RLGVQAADRL LERHLQDEGD HLRQLGLSVW
GTATMRTGGD DIAQALALMG VRPVWQPGSQ RVERFEVLPL EQLGRPRVDV TLRVSGFFRD
AFSNLIRLFD EAVQAVIELD EPEDMNPLSA RVWRESLALK DGGLDEAEAR RQAGWRVFGA
KPGAYGAGVQ NAIEERLWQS RADLAEVYLN WGGYAYGSGA EGLPARQRFV DRLEQMQAVL
HNQDNREHDI LDSNDYYQFQ GGMLAAVETL RGLKVASYFG DNSQPDTPRI RSLKEELNRV
VRARAANPKW IAGMKRHGYK GAFELAATID YLFAFDATSE LVDDHQYALL TDAYLLDRDT
RDFIQQHNPG ALNDILERLL EAQQRGLWEN PGEYREALEN LLLDSEES
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