| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4581 |
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| Symbol | |
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| ID | 5106892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 5026415 |
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| End bp | 5028571 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505852 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001190060 |
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| Protein GI | 146309595 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCCC TGCCGTTTTC CCGCCAACCT GCCCGCCTCA CCCTGCTCGC CCTCGCTTGC
CTGAGCGGCC ACAGCGCCTT CGCCGAAGAG CCCATGCAGC TCGATTCACT GCAGGTCACC
GGCGAACAGG TAAGTGAAGT AGAGGCTGCG CGCGAGGAGC TCAACCGCGT CCCCGGGGCC
ACCAATGTGG TGGATATGGC CAAGGTCGAA CAAGGCCGCG TGGCCGGCGT CGCCGATGTG
CTGGCCTACC AGCCCGGCGT CTACGCGCAG TCTCCCGGCA ACGAAGGCGT GAAGATCAGC
ATGCGCGGCT CGGGTATCAA CCGTGGCCCC GGCTCGCACG CCTCCGGCAC CCATATCCTG
CTCGACGGCC TACCGCTGAC CGGCTCCGGC GGCACGCCCT ACGAACTGCT GGAACCGCTG
TGGATAAGTC GCGCCGAAGT GCTGCGCGGC GCCAATGGCT TCGAGCGTGG CGCGCTGGCC
CTGGGCGGCG CCATCGACTA CATCAGCCAC ACCGGCTACA CCGCGCCCAA GCTGCAACTG
CGCTATGAAG TCGGCAGCCA TGGCTACCAG AAGCGCAACA TCGCCTCCGG TCAGGTGCTG
GGCGATTTCG ACTACTACGT CGCCCTCACC GACAGTGAAA CCGACGGCTA TCAGGATCAG
TCATCGGGCA AAGGTAAAGG CATCGCCGCC AACTTCGGCT ACCGGCTCAA CGAGAACCTG
GAAACGCGCT TCTACCTGCG CTACCGCGAG ACCGAACACG AAACACCCGG TCGCCTGACC
AAGGCCCAGC TCAAGGACGA TCCACGCCAG GCCGCTGCCA ACAACCTGCG CATCGACGCC
CACCGCGACC AGCCCGGCAG CACCTGGCTG GCCAACAAGA CCACCTGGCA GATCGACGAC
GACGCCACCC TGGTCGCCGG CCTGGCCTAT CACCATTACC CCATGGATAT CGTCGAAACC
CGCTTGCCCA ATGGCAACAC CTATCGCATC CGCGTGGACT ACAGCGATAT CAGCGGCACT
CTGAACTACA CGCGCCGGCA TACCCTGTTC GGCCTGAACA GCGTGACCAC CATCGGCTGG
CGCAGCACCA CCAACCTGCC GAGCAGCACA TCCAGGGAAA CCGCAGCGCT GCCGATCAAT
GTGGAGTCCG GCGGCACAAC TATCACCTAT CCCGCCGGCA CCCTGATGCG CGACTACGAA
CACCTGGGTT CGGACAACGT GCTGCACTTC AGCAATGACA CTGAGCTGAT GCCCGACCTG
TGGCTGACCA GCGGCCTGGC GCTGATCCAT ACCCGCCGCG AAGCCGAAGT GACCTGGCCG
GCCACCGACG ACAGGCTCAG CGAACAAACC TGGGACTACG CACCGCGCCT CGGCCTGCGC
TATCAGCTCA ACCCGGACGT GCAACTGTTC GGCAATATCA GCCGCTCGGT GGAGCCGCCG
CATGCCTGGT CGATGCTCTG GAGTTCGCCG CTGCGCTTCC CGACCAGCAA CCAGCCATGG
AGCAACCGCC AGAGCGCCGC CATCAGCCTG GACAACCAGA CCGCCACCAC CGTCGAAGTC
GGCGGGCGCG GCGATTCCGC ACTGGGCCAG TGGGAACTGA CCTACTACTA CTCACAGGTG
CGCCATGAAC TGCTCACCGT CGAGATCGAG CCCAACGTCT TCGCCGAATC CAACGCCAGC
CCCACCGTGC ATCAGGGCAT CGAAGCCGGC CTGACCAGCC CGTTGTGGCA AGGTGGCGCC
GCTGGCGCCC TGAGCCTGCG CCAGGCCTAC ACCTTCAGCG ACTTCCACTA CCGCGATGAC
GACACCTTCG GCGACAACCG TCTGCCGGGC CTGCCGCGCC ACTACTACCA GGCCGAGGTG
CGCTACGACC ACCCGAGCGG CTTCTACGCC GGCGTGAATA CCCAGTACGC CTCGAAAGTG
GCTGTGGACT ACGCCAATTC CTACTACGCC GACGCCTATG CCACCTTCGG CGCCACCCTC
GGCTACGCCT CGCCGAGAGA CGACTGGCAA GCCTGGCTCG ACCTGCGCAA CCTGACCGAC
AAACGCTATG CCGCCACCGT CACGCCGGGC TATAACGACA ACGGCGCAGA CGCGGCGCGC
TCCACGCCTG GGGAAGGGTT TGGGGTATAT ACGGGGGTTT CTTGGAGTTG GCTCTGA
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| Protein sequence | MLPLPFSRQP ARLTLLALAC LSGHSAFAEE PMQLDSLQVT GEQVSEVEAA REELNRVPGA
TNVVDMAKVE QGRVAGVADV LAYQPGVYAQ SPGNEGVKIS MRGSGINRGP GSHASGTHIL
LDGLPLTGSG GTPYELLEPL WISRAEVLRG ANGFERGALA LGGAIDYISH TGYTAPKLQL
RYEVGSHGYQ KRNIASGQVL GDFDYYVALT DSETDGYQDQ SSGKGKGIAA NFGYRLNENL
ETRFYLRYRE TEHETPGRLT KAQLKDDPRQ AAANNLRIDA HRDQPGSTWL ANKTTWQIDD
DATLVAGLAY HHYPMDIVET RLPNGNTYRI RVDYSDISGT LNYTRRHTLF GLNSVTTIGW
RSTTNLPSST SRETAALPIN VESGGTTITY PAGTLMRDYE HLGSDNVLHF SNDTELMPDL
WLTSGLALIH TRREAEVTWP ATDDRLSEQT WDYAPRLGLR YQLNPDVQLF GNISRSVEPP
HAWSMLWSSP LRFPTSNQPW SNRQSAAISL DNQTATTVEV GGRGDSALGQ WELTYYYSQV
RHELLTVEIE PNVFAESNAS PTVHQGIEAG LTSPLWQGGA AGALSLRQAY TFSDFHYRDD
DTFGDNRLPG LPRHYYQAEV RYDHPSGFYA GVNTQYASKV AVDYANSYYA DAYATFGATL
GYASPRDDWQ AWLDLRNLTD KRYAATVTPG YNDNGADAAR STPGEGFGVY TGVSWSWL
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