Gene Pmen_4577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4577 
Symbol 
ID5106888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp5022393 
End bp5022962 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content65% 
IMG OID640505848 
Productflavin reductase domain-containing protein 
Protein accessionYP_001190056 
Protein GI146309591 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCT CTATCTGTCC CGTCGACCTG ACCAAGGCCT ATCGTCTGCT CAACCACGGT 
CCCACCGTGC TGGTGTCGGC GCGTCATCAG GCTGTGGATA ACGTCATGGC GGCAGCCTGG
TGCTGCGCCC TGGATTTCGA CCCGCCGAAG CTTACCGTGG TGATCGACAA GGCCACGCGC
ACCCGCGCGC TGGTCGAAGG CAGTGGCCTG TTCGCCATCC AGGTGCCGAC CGTGGCGCAA
CTGCAGCTGA CCCAAGCGGT GGGCAGCGCC AGCCTGACCG ATGATCCGGC GAAGCTGGCG
CATGCCGGGG TCGAGTTGTT CGAGATGCCA GGCCACGATG TGCCGCTGGT GGCGGGCTGC
TCAGCTTGGC TGGTCTGCCG GCTGATCGAT GAGCCGCACA ACCAGCAGGC CTATGATCTG
TTCATTGGCG AGGTGATTGC GGCCTGGGCG GACGAGCGCG TGTTTCGCGA CGGTCGCTGG
CATTTCGAGA CGGCCGACCC GAGCCTGCGC AGCCTGCATC ACGTGGCGGG CGGGCACTAT
TACGCGATTG GTGAGGCGTT GAAGGCCTGA
 
Protein sequence
MSASICPVDL TKAYRLLNHG PTVLVSARHQ AVDNVMAAAW CCALDFDPPK LTVVIDKATR 
TRALVEGSGL FAIQVPTVAQ LQLTQAVGSA SLTDDPAKLA HAGVELFEMP GHDVPLVAGC
SAWLVCRLID EPHNQQAYDL FIGEVIAAWA DERVFRDGRW HFETADPSLR SLHHVAGGHY
YAIGEALKA