Gene Pmen_4573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4573 
Symbol 
ID5106884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp5017972 
End bp5018712 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content66% 
IMG OID640505844 
Productprecorrin-2 C(20)-methyltransferase 
Protein accessionYP_001190052 
Protein GI146309587 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2243] Precorrin-2 methylase 
TIGRFAM ID[TIGR01467] precorrin-2 C20-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGCC GTCTGCTCGG CCTCGGCGTC GGCCCCGGCG ACCCCGAGCT GCTTACCCTC 
AAGGCGCTGC GCCTGCTCAA AGGCGCACCA GTGGTGGCCT ACTTCGTGGC CAAGGCCAAG
CACAACGCCG GCCACGGCGG CAATGCCTTC GGCATCATCG AAGAGCACCT GAGCGATACC
CAGCAGCGCC TGCCGCTGGT CTACCCGGTG ACTACCGAGA AGCTCGCCCC GCCGCTGAGC
TACGAGGATG TGATCGCCGA CTTCTACGAC ACCTGCGCCG AGCAGATCGC CCAGTTGCTC
GATGCCGGCC AGGACGTGGC GGTGATCTGC GAAGGCGACC CGTTCTTCTA CGGCTCCTAC
ATGTATCTGC ACGACCGCCT GGCCGAGCGC TACGAGGTGG ACGTGGTGCC CGGCGTGTGC
TCGATGCTCG GCTGCGCCTC GGTGCTCGGC ACGCCGCTGG TGTACCGCAA CCAGAGCTTG
AGCGTGCTCT CCGGCGTGCT GCCGGAAGAC GAGCTGGAAC AGCGCCTGCG CGACGCCGAA
GCGGCGGTGG TGATGAAGCT CGGGCGCAAC TTCGACAAGG TGCGCCGCGT GCTGCGCAAG
CTCGGCCTGG ACAACCGCGC CCATTACGTC GAACGTGCCA CCATGGCCAG CCAGAAGATC
GTGCCACTGG ATGAGGTGGA GCCAATGGAT TCGCCGTATT TCTCCATGAT TCTGGTGCCC
GGCCAGAAAT GGCGGGGGTG A
 
Protein sequence
MAGRLLGLGV GPGDPELLTL KALRLLKGAP VVAYFVAKAK HNAGHGGNAF GIIEEHLSDT 
QQRLPLVYPV TTEKLAPPLS YEDVIADFYD TCAEQIAQLL DAGQDVAVIC EGDPFFYGSY
MYLHDRLAER YEVDVVPGVC SMLGCASVLG TPLVYRNQSL SVLSGVLPED ELEQRLRDAE
AAVVMKLGRN FDKVRRVLRK LGLDNRAHYV ERATMASQKI VPLDEVEPMD SPYFSMILVP
GQKWRG