| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4567 |
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| Symbol | |
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| ID | 5107025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 5010050 |
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| End bp | 5012290 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505838 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001190046 |
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| Protein GI | 146309581 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.436524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATGTT ATAACGCTAA CATTATCGCC TCAGGCCGGG CCGGCGAGGA GTCGAAGCTG
AACGCTTGCA ACTCGCCCGC ACGTGGCCTG GAGCGACTCC ACGAATCCCC TCGAAGCCCC
GGAATCACTC ACGTGCAGCA CTTTCTTCGT CATTGCCCCC TGCCATTCGC GCTGCTGCTT
GGCGGTGTGG CCATGGCCAG CGAATCTCCT GTCGATCTGC CCGCGGTCAC GGTCCAGGCG
CAAGCCGTGG AGGAGGGCGA GAGCGATCTG CATACGCCCA CCACGTCCGG CTCGCGCCTG
GAGCTGTCGG CGCTGCAAAC CCCGGCCAGC ACCAGCAGCC TGAGCGGCGC CGAGGTACGC
GCGCGCAACA ACCTCACGGT GCAGGACGCC GTGACCCGCA CACCGGGCAT CAGCAGCATC
GGCTCACCCG GCAATGGCGG CACGGCGCTG TCGGCGCGCG GTTTTACCGG CCATGCGGCG
ACCATGCAGC TGTACGATGG CACCCGTCAG TACGTCGGTG CCGGCACCGT GACCTTCCCG
GTGGACACCT GGTCGGTGGC GCGTATCGAC GTGCTGCGCG GCCCGGCCTC GGTGCTCTAC
GGCGAGGGGG CCACCGGCGC GGTGATCAAC GTGGTGCCGA AGAAGCCCTT CGCCGGCGAG
GTCCGCAACC AGCTGCGCCT CGGCTACGGC AGCGACGACC GCCGTCAGGC CGCGCTGGAC
AGCGGTGGTT CGCTGAGTGA CGAACTGAGC TATCGCTTCA ACGTCAACCA GCAGGCCAGC
AATGGCTGGG TCGACCGGGG CGATTCGGAC AGCGTCGCGC TCAGCGCCGC CCTGCGCTGG
GACGCCAATG ACGACCTGAG CTTCACCCTG TCCCACGATC ATGGCGAGCA GAGCCCGATG
CGTTATCTCG GCACGCCGCT GGTGGCCGGC AAGTACCGCG AGAGCATCCG CGAGCGCAAT
TACAACGTCG CCGACGCGGA TATCCGCTAC AACGACCAGA TCACCCGCCT GGTGACTGAC
TGGCGCATCA GCAACGCGCT CAGCGCCAGC AACCAGCTCT ACTACATCAA GACCCAGCGC
TACTGGCGCA ATGCCGAGGC CTATCGCTGG CAGCCGGGCG ATACGGTCGA GCGCAGCGAG
TTCTACCGGA TCAAGCACAC CCAGGAGCAG GTCGGCGACC GCCAGACCTT CACTCTCGAT
CACGCCCTGT TCGGGCTCGA CAGTCGTACC GTGGTGGGTG TGGATTACAA CCGCATCCAC
TTCGCCCGCC AGCATGATTT CGCCAGCAGC TTCAGCGACA GCGTGCCGCT GGCCGGCTCC
GGCGGCGGGC AGTACCAGAG TACCGATCCG CTCGGCTACG GCCCGCGCGA GCGCAACCTG
GCGCGGCAGT TCTCGCTGTT CGCCGAGAAC CGCACCCAGC TGACCGAGCG CCTGTCGCTG
GTGACCGGCG TGCGCCGCGA CCAGGTGCAT CTGCAGCGCG ACAACCTGAT CGATGGCAGC
CGCGCCGACC GCAGCCTCAG CGGCGACAAC TGGCGCGCCG GCCTGGTCTT CGCCCTGACC
CCGGAGCTGT CGCTGTACGG CCAGTACGCC ACCAGCACCG AGGGCGTGAG CAACCTGCTG
ACCCTCAACC CGACGCAGCA GCAGTTCGAC CTCAGCGAAG CCAGGCAGAG CGAAATCGGC
CTCAAGCAGA TGTTCTGGAA TGGCCAGGGC GAGTGGACGC TGGCCGCCTA CCACATCGTC
AAGAAGAAGC TGCTCAGCCG CGAAACGCCG ACCTCGCCCA CCGAGCAGAT CGGCCAGCAG
TCGTCCGATG GCCTGGAGGC CACGCTGGAA CTGGCGCTGG GTCAGGGCTG GCAGGTGTCG
GCCAACGCCG CCCTGGTGCG CGCCGAGTAC GACGACTTCA TCGATGGCGG CGGCGACCGC
AGCGGCAATC GCCCGACCGA CGTGCCGCGG CGCACCGCCA ACCTGTGGCT GAACAAGGCG
CTCGGTTGCG GCGTGGAGGC CGGCATCGGC GCGCGTTATG TCGATGCGCG TTATGTCGAT
ACGGCCAACA CCGCCAAGGT GCCTGGCTAC ACCGTGGTCG ACGCCAACAT CGCCTGGCAG
GCGTTGCCGG ATGTGCGCCT GGGCCTTGAG CTGAACAACC TGTTCAACCG CCAGTACGCC
ACCAGCGCCA GCAGCGACGG TGAGCAGTGG TACCTGGGCG CGCCGCGTTC GTTCTTCGTC
ACGGCGGATT ACAGCTTTTG A
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| Protein sequence | MLCYNANIIA SGRAGEESKL NACNSPARGL ERLHESPRSP GITHVQHFLR HCPLPFALLL
GGVAMASESP VDLPAVTVQA QAVEEGESDL HTPTTSGSRL ELSALQTPAS TSSLSGAEVR
ARNNLTVQDA VTRTPGISSI GSPGNGGTAL SARGFTGHAA TMQLYDGTRQ YVGAGTVTFP
VDTWSVARID VLRGPASVLY GEGATGAVIN VVPKKPFAGE VRNQLRLGYG SDDRRQAALD
SGGSLSDELS YRFNVNQQAS NGWVDRGDSD SVALSAALRW DANDDLSFTL SHDHGEQSPM
RYLGTPLVAG KYRESIRERN YNVADADIRY NDQITRLVTD WRISNALSAS NQLYYIKTQR
YWRNAEAYRW QPGDTVERSE FYRIKHTQEQ VGDRQTFTLD HALFGLDSRT VVGVDYNRIH
FARQHDFASS FSDSVPLAGS GGGQYQSTDP LGYGPRERNL ARQFSLFAEN RTQLTERLSL
VTGVRRDQVH LQRDNLIDGS RADRSLSGDN WRAGLVFALT PELSLYGQYA TSTEGVSNLL
TLNPTQQQFD LSEARQSEIG LKQMFWNGQG EWTLAAYHIV KKKLLSRETP TSPTEQIGQQ
SSDGLEATLE LALGQGWQVS ANAALVRAEY DDFIDGGGDR SGNRPTDVPR RTANLWLNKA
LGCGVEAGIG ARYVDARYVD TANTAKVPGY TVVDANIAWQ ALPDVRLGLE LNNLFNRQYA
TSASSDGEQW YLGAPRSFFV TADYSF
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