Gene Pmen_4566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4566 
Symbol 
ID5107024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp5009164 
End bp5010006 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content69% 
IMG OID640505837 
ProductABC transporter related 
Protein accessionYP_001190045 
Protein GI146309580 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGTGA ATAGTGCCGC TGGCTGGCCT GCCAGTCTGT TCCCGCCACC CGCGAGCCGC 
CGTACGGCGG CGCCTGAGCC GCGCCTGCGC ATCCGTGATC TGGCCTGGTC GCCGGATGGC
CAGCGCGCCT TGCTCGAGGC CATCGATCTG GAGATCGGCG ATGGTGAGCT GCTCGGTCTG
ATCGGCCCCA ACGGCAGCGG CAAGACCAGC CTGCTGCGCT GCGCCTATCG CTTCCAGCGG
CCGTGCAGTG GCCAGGTCGA ACTGGACGGC GAGGCGCTCT GGCAGCGCTC GCCGCGCTGG
AGCGCGCAGC GCGTGGCGGT GGTGCTGCAG GAATTTCCGC AGGACTTCGG CCTGCGCGTG
CACGAGGTGG CGGCCATGGG CCGTACGCCG CACAAGGGCC TGTTCGATGG CGACGATGCC
GAGGATCGGC GCCTGGTGGA TGAGGCGCTG GCCCGTGTCG GTTTGAGCGA CCTGGCGCAG
CAGCCCTTCG CCTGCCTCTC GGGTGGCGAG AAGCAGCGCG CTCTGCTTGC TCGCGCTTTG
GTGCAGCAGC CGCAAGTGCT GATCCTCGAC GAGCCGACCA ACCACCTCGA CCCGCGCTAC
CAGCTCGAAC TGCTGGGCCA GATCAAATCG CTGGGCCTGG CGACCCTGGC CAGCTTCCAT
GACCTGAACC TGGCGGCGGC CTTCTGCGAC CGCCTCTGTG TGCTCGACCA GGGCCGTCTG
GTGGCCGTCG GCACGCCCGC CGAGGTGCTC ACCGCCGAAC TGCTGCAGCA GGTGTTCGGC
GTACGGGCGC TGGTCGATAC CCATCCACTG GCGGGGCATC CGCGTATTAC CTGGATTGTT
TGA
 
Protein sequence
MSVNSAAGWP ASLFPPPASR RTAAPEPRLR IRDLAWSPDG QRALLEAIDL EIGDGELLGL 
IGPNGSGKTS LLRCAYRFQR PCSGQVELDG EALWQRSPRW SAQRVAVVLQ EFPQDFGLRV
HEVAAMGRTP HKGLFDGDDA EDRRLVDEAL ARVGLSDLAQ QPFACLSGGE KQRALLARAL
VQQPQVLILD EPTNHLDPRY QLELLGQIKS LGLATLASFH DLNLAAAFCD RLCVLDQGRL
VAVGTPAEVL TAELLQQVFG VRALVDTHPL AGHPRITWIV