| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4562 |
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| Symbol | |
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| ID | 5107020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 5004062 |
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| End bp | 5005837 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505833 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001190041 |
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| Protein GI | 146309576 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTCG ACTCTGTCTT CGAGCCGCCC ATGCCCCTGC AGCATCGTTA TCGCGTTCTG
TTCACCGTTC TGGTCATTCT CGCCGGCCTG CTGGCGAGCC TCTGGCTGGG CGGGCGGTAT
GCCGAGCAGC GCGCCTGGGC CGAGCGCAGC GTCGAGGCGC GCGGCCAGTT GCTGCTCTAT
GCCCAGTCGA TCCGCACCCT GGTCGAGCGC TTCAGCTCGG TGCCCGAGGT GCTGGCGCTG
GACAGCGACA TCCGCAGCCT GCTGCGTGCG CCGCAGGATC GCCAGCTGCG TCTGGCCCTC
AACCAGCGCC TGGAGCGGCT CAACGCCGCT GCCGGTTCCA CCGTGCTGTA CCTGCTCGAT
ACCCGGGGCG AAACCCTGGT GGCCAGCAAC TGGCGCGACT GGAGCAGCTT CGTCGGCAAC
AACTACGCCT TCCGGCCCTA TTTCCAGGAT GCCCTGCGCG ACGATGGCGC GCGCTACTTC
GCGGTGGGCG TGACCACCGG CATTCCCGGC TACTTTCTGT CCCACGTGGT GCGTGACGAC
GACGGCACCC TGCTCGGGGT GCTGGTGGTC AAGCTGGAAC TGGAAGACCT GCAACGTGAA
TGGCTCGGTC AGCCCGGCGT GCTGCTGGTC GCCGACAGCT ACCAGGTGGT GATCCTCAGC
AACAAGCCGG CCTGGCGCTT CCGTGCCCTG CAGCCGCTCG ACGAGCAGGC CCGTGCCGAG
CTGGTGGAGG TGCGCCGTTA TGCCGAGCAG GCGCTGCAGC CGCTGGCCCA TCAGGTGCAC
CGGCACATCG ATGGCGACGC CGCCTGGGCG CGGGTCGAGG GCCCCGACGG CAGTCGCGAC
TACCTCTGGC AGCGCCTGGC CATGCCCGAG GAAGGCTGGA CCCTGCACCT GCTCAGCGAG
CCGTCCGGGC TGGCCGACAG CGTGCGCAGC TACCGCCTGG CCGCCGCCGG GGTGTGGATG
ACCCTGGCCT TCCTTCTGCT GTTCCTTATC CAGCGGCGCA AGAACCAGCG CCTGCAGGCC
GGGATCCGCG AGCGCCTGGA GCGTGAGGTG GAGCTGCGTA CCGCCGAGCT GCGCGAAGCC
CAGGACGGCC TGGTGCATGC CGCCAAGATG GCCGCGCTGG GACAGATGTC GGCGGCCCTG
GCGCACGAGA TCAACCAGCC GCTGACCGCC CTGCAGATGC AGCTCGGCAG CCTGCGCCTG
CTGCTCGATA GCGGCCGGCC CGAGGCGGTG CGCGAGGGCC TGCAGCGCAT CGACGGCCTG
CTGCAGCGCA TGGCGGCACT GACTGGTCAC CTCAAGACCT TCGCCCGCAA GACCCCGGCC
GGCCTCAGCG AGCGCCTGTG CCTGGCCGAC GTGCTGGAGC AGGCGTTGCA ACTGCTGGCG
CCGCGCATGC GCAGCGAGCA GGTGGAACTG CGTACCCAGG TGGACGCCGG CGCCGAGGTG
CTCGGCGATG CGATTCGCAT CGAGCAGGTG ATCCTCAACC TGCTGCACAA CGCCCTCGAC
GCCATGACCG AGAGCGAGGT GCGCATCCTT CAGGTGGGCA TCTCTCGTGA GGGCGATACC
TGCCTGCTCA GCGTCGAGGA CAGCGGCGGC GGCATTGCCG AGGAAACCCT GGGCCGGGTG
TTCGAGCCCT TCTTCACCAC TAAGCCCGTA GGTCAGGGTT TGGGCCTCGG TCTGGCGGTG
TCCTACGGCA TCGTGCGCGA TCTCGGCGGC AGCCTGGAGG CGCACAACGG CGCGCTGGGC
GCAGTGTTCA CCTTGCGTTT GCCGACCGCG CCTTAA
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| Protein sequence | MRLDSVFEPP MPLQHRYRVL FTVLVILAGL LASLWLGGRY AEQRAWAERS VEARGQLLLY
AQSIRTLVER FSSVPEVLAL DSDIRSLLRA PQDRQLRLAL NQRLERLNAA AGSTVLYLLD
TRGETLVASN WRDWSSFVGN NYAFRPYFQD ALRDDGARYF AVGVTTGIPG YFLSHVVRDD
DGTLLGVLVV KLELEDLQRE WLGQPGVLLV ADSYQVVILS NKPAWRFRAL QPLDEQARAE
LVEVRRYAEQ ALQPLAHQVH RHIDGDAAWA RVEGPDGSRD YLWQRLAMPE EGWTLHLLSE
PSGLADSVRS YRLAAAGVWM TLAFLLLFLI QRRKNQRLQA GIRERLEREV ELRTAELREA
QDGLVHAAKM AALGQMSAAL AHEINQPLTA LQMQLGSLRL LLDSGRPEAV REGLQRIDGL
LQRMAALTGH LKTFARKTPA GLSERLCLAD VLEQALQLLA PRMRSEQVEL RTQVDAGAEV
LGDAIRIEQV ILNLLHNALD AMTESEVRIL QVGISREGDT CLLSVEDSGG GIAEETLGRV
FEPFFTTKPV GQGLGLGLAV SYGIVRDLGG SLEAHNGALG AVFTLRLPTA P
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