| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4543 |
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| Symbol | |
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| ID | 5107001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4979855 |
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| End bp | 4981774 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505814 |
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| Product | CBS domain-containing protein |
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| Protein accession | YP_001190022 |
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| Protein GI | 146309557 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.661781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCG AGCTGATCGA GATCCGCGAC CACCTGAATC GCTTCGCCCC CTTCGACACG
CTGCCGGAGC AGACTCTCGA CGAGATCGCC CGTCAGGTGC AAGTGGGCTA CTTCAAGTCG
GGTAGCGAAA TCCTCGCCGT CGGTGCGCCG ATCCACGAGT TGCACTACGT GCGCAGCGGC
GCGGTGGAGA TCCATCGGCG TGGCGGCGAG CTGCACAACC GCCTGGCCGA GGGCGACATC
TTCGGCCAGG CCGGCCTGCT GCGCGGCAAC AAGGTGCGCC TGGGCGCCAC GGCGCTGGAA
GACTGCCTGA TCTACTTCAT CCCCGGCGCG CTGTTCCACC AGCTCTGCGA GCAGTTCGAC
AATTTCGCCG ACTTCGTCGA GGCCGAAGGT CAGTCGCGGC TGAAATCCGC CCTGGAAGAC
AGCCATGGCA AGGCCAGCGA GCTGATGAAG ATCAAGGTAC GCAAGCTGAT CTCGCGCGGC
GCGGTGAGCG TGCCGCTGGA TACGCCGATT CAGCAGGTGG CACAGGTGAT GACCGAACAC
GGCGTGTCCT CGGTGATCGT CGTCGACCCC GGTACGCGCT GGCCCGACCC GCAGCAGGTG
GACGTGGCCG AGCAGCAGAA TCAGGTAATG GCCGGCATCC TCACCGACCG CGACCTGCGC
ACCCGCGTGG TCGCCGCCGG GCTGCCCAGC AGCACCCCGG TAAGCCAGGT GATGACGCCC
AACCCCGTCA CCCTGCAGGC CGACGACTCG GTGTTCGAGG CCATGCTGTG CATGCTGCGC
AACAACATCC ACCATCTGCC GATCCTCCAT CGGCGGCGCC CGGTGGGGGT GGTGGCGCTG
GCCGACATCG TCCGCTACGA GTCGCGCAGC AGCCTGTATC TGGTCAACGG CATCTTCAAC
AAGACGTCGG TGGAAGGGCT CAAGAGCCTG CTGCCGGACC TGCGCGCCAC CTTCGTGCGC
ATGGTCGCCG ACGACGCCAG CGCACACATG GTCGGCAGCG CCATGAGCGG TATCGGCCGC
GCCTTCAGCC AGCGCCTGCT GGAGCTGGCC GAACAGAAAC TCGGCCCGCC GCCGGTGCCC
TACTGCTTCA TGGTCGCCGG CTCCATGGCC CGCGACGAAC AGTTGCTGCT CACCGACCAG
GACAACGCCC TGGTGCTCGA CGACCGCTTC GATGCCGACG AGCACGACGC CTACTTCGCC
GAACTGGCGC AGTTCGTCAG CGACGGCCTG GCCGCCTGCG GTTACAGCTA CTGCAAGGGC
GGCATCATGG CCACCAACCC CAGGTGGCGG CAGCCGCTGA AGGTGTGGCG GCAGTACTTC
AGCGAGTGGA TCGAGCGACC CAACCCGGAA ACCCTGCTCA ATGCCAGCAT CTTCTTCGAC
CTCGACGGCC TCTACGGCGA AACCGAGCTG GTGGAGAACC TCAAGGACCT GCTGGCACAG
AAGGCCAGCG CCAGCCCCGC CTTCCTCGCC GCGCTGGCGC GCAATGCGCT CAACCGCACG
CCGCCGCTGG GCTTCTTCCG CACCTTCGTG ATGGAAACCG ACGGCCGCCA GAAGAACATC
ATCAATCTCA AGGGGCGCGG TACCGCGCCG CTTACCGACC TGATCCGCGT GCATGCCCTG
GCCTGCGGCT CCAAGGCGCA GAACTCGCTG GATCGCCTCG ACGCCATCGC CGCCACCAAG
CTGCTGCCCA GGGAGGCGCT GGAGCACCTG CGCTATGCCT TCGAATTCCT CAGCCTGGTG
CGCGTGCGCC ACCAGGCCCG CGAAGTCGAG GCCGGCAACG CGCCGAGCAA CTACATCGAG
CCGGAACAGT TCAGCGCCAG CGAACGCCAG CACCTCAAGG AAGCCTTCCA GGTGATCAGC
AACGCACAGA AGTTCCTGCG CTTTCGCTAC CCGGCCCAGC CGGCGAGTCG CCCGCAATGA
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| Protein sequence | MQIELIEIRD HLNRFAPFDT LPEQTLDEIA RQVQVGYFKS GSEILAVGAP IHELHYVRSG
AVEIHRRGGE LHNRLAEGDI FGQAGLLRGN KVRLGATALE DCLIYFIPGA LFHQLCEQFD
NFADFVEAEG QSRLKSALED SHGKASELMK IKVRKLISRG AVSVPLDTPI QQVAQVMTEH
GVSSVIVVDP GTRWPDPQQV DVAEQQNQVM AGILTDRDLR TRVVAAGLPS STPVSQVMTP
NPVTLQADDS VFEAMLCMLR NNIHHLPILH RRRPVGVVAL ADIVRYESRS SLYLVNGIFN
KTSVEGLKSL LPDLRATFVR MVADDASAHM VGSAMSGIGR AFSQRLLELA EQKLGPPPVP
YCFMVAGSMA RDEQLLLTDQ DNALVLDDRF DADEHDAYFA ELAQFVSDGL AACGYSYCKG
GIMATNPRWR QPLKVWRQYF SEWIERPNPE TLLNASIFFD LDGLYGETEL VENLKDLLAQ
KASASPAFLA ALARNALNRT PPLGFFRTFV METDGRQKNI INLKGRGTAP LTDLIRVHAL
ACGSKAQNSL DRLDAIAATK LLPREALEHL RYAFEFLSLV RVRHQAREVE AGNAPSNYIE
PEQFSASERQ HLKEAFQVIS NAQKFLRFRY PAQPASRPQ
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