| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4514 |
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| Symbol | |
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| ID | 5106972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4951741 |
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| End bp | 4952835 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505785 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001189993 |
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| Protein GI | 146309528 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCC GCAATCTGTT CGGCGCCGCT CTGGCGCTGT TCGCCGCCAT CGGCCTGGTT
GGCTGCAAGG ACGACAAGGC CGGTAGCGAG CAAGCCGCCG CCAAAACCGC AGAAACCTTC
CATTGGAAGA TGGTCACTTC CTGGCCGAAG AACTTCCCCG GCCTGGGCAC CGCTGCCGAG
CGCCTGGCCG AGCGTATCAA CGCCATGAGC GCCGGGCGTC TGACCGTCAA GGTCTACGCC
GCCGGTGAGC TGGTGCCGGC GCTGGAAGTG TTCGACGCCG TCTCCCGCGG CACCGCCGAG
ATGGGCCACG GCACCCCGTA CTACTGGAAG GGCAAGGTCC CGGCCGCGCA GTTCTTCAGC
AGCGTGCCGT TCGGCTTCTC CACCCTGGAA ATGAACGCCT GGCTCAGCCA CGGCGGCGGT
CAGGCGCTGT GGGACGAAAC CTATGCCCCC TACGGCGTGA AACCGCTGTC GGCGGGCAAC
ACCACCATGC AGATGGGCGG CTGGTTCAAC AAGGAAATCA ACAGCCTGGC CGACATCAAG
GGCCTGAAGA TCCGCATGCC GGGTCTTGGC GGCGAAGTCT GGAGCAAGCT CGGCGCGATC
ACCGTCAACC TGCCCGGCGG CGAGATCTTC ACCTCCCTGC AGACCGGCGC CATCGATGCC
ACCGACTGGG TCGGCCCGTA CAACGACCTG GCCTTCGGCC TGCACAAGGC GGCCAAGTAC
TACTACTTCC CGGGCTGGCA GGAGCCGCAG GCCGTGGTCG AATCCATGGT CAACCAGAAG
GCCTTCGACG CGCTGCCGGC CGATCTGCAG GCCATCGTCG TCGAGGCCGC GCGCGCCGCC
ACCCTGGACA TGATGAACGA CTACGTGTTC AACAACGCCA AGGCGCTGCA AAGCCTGAAG
AGCGAAGGCG TTCAGTTCAA GCGTCTGCCG GACGAAGTGC TGCAGGCCAT GCGCGAGCAG
TCCGGCGTGG TACTCGAGTC CCTGGCCGCG GAAAACGACC TCAACGGCCG CATCTGGGCC
TCGCAGAAGG CCTTCCTCGA AGAGGCCAGC GCCATGCAGT CGCTGACCGA GAAAGAGCTG
TACAACTGGC GATGA
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| Protein sequence | MNRRNLFGAA LALFAAIGLV GCKDDKAGSE QAAAKTAETF HWKMVTSWPK NFPGLGTAAE
RLAERINAMS AGRLTVKVYA AGELVPALEV FDAVSRGTAE MGHGTPYYWK GKVPAAQFFS
SVPFGFSTLE MNAWLSHGGG QALWDETYAP YGVKPLSAGN TTMQMGGWFN KEINSLADIK
GLKIRMPGLG GEVWSKLGAI TVNLPGGEIF TSLQTGAIDA TDWVGPYNDL AFGLHKAAKY
YYFPGWQEPQ AVVESMVNQK AFDALPADLQ AIVVEAARAA TLDMMNDYVF NNAKALQSLK
SEGVQFKRLP DEVLQAMREQ SGVVLESLAA ENDLNGRIWA SQKAFLEEAS AMQSLTEKEL
YNWR
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