| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4513 |
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| Symbol | uvrD |
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| ID | 5106971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4949534 |
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| End bp | 4951717 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505784 |
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| Product | DNA-dependent helicase II |
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| Protein accession | YP_001189992 |
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| Protein GI | 146309527 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACG ACCCCGAACT CCTCCTCGCT TCGCTCAACG ACGCCCAGGT CCAGGCCGTG
GCCGCCCCGC TCGGCCGCCA GCTGGTGCTG GCCGGCGCCG GCTCGGGCAA GACCCGCGTG
CTGGTGCACC GCATCGCCTT CCTGATCCAG GCGATGGGCG CCTCGCCTCA CTCGATCCTG
TCGGTGACCT TTACCAACAA GGCCGCCGCC GAGATGCGCC ACCGCATCGA GCAGATGCTC
GGCCACAACC CGGCCGGCAT GTGGGTCGGC ACCTTCCACG GCCTGGCTCA TCGCCTGCTG
CGCGCGCACT GGCAGGAAGC CGCGCTGACC GAGAATTTCC AGATTCTCGA CTCCGACGAT
CAGCAGCGCC TGATCAAGCG GGTGATCCGC GAACTGGGCC TGGACGAACA GCGCTGGCCG
GCCAAGCAGG CGCAGTGGTT CATCAACGGG CAGAAAGATG AGGGGTTCAG ACCCCAGCAC
ATCCAGGCCG GCGGTGACCT GTTCCTGGCC ACCATGCGCG GCATCTACGA GGCCTACGAG
GCGGCCTGCG CGCGCACCGG GGTGATCGAC TTCTCCGAGC TGCTGCTGCG CGCCCTCGAC
CTGTGGCGCG ACAAGCCGGG CCTGCTCGAA CATTACCAGC GGCGTTTCCG TCATATCCTG
GTGGACGAGT TCCAGGACAC CAACGCCGTG CAGTACGCCT GGCTGCGTCT GCTGGCCAAG
GGCGGCGACA GCCTGATGGT GGTGGGCGAC GACGACCAGT CGATCTACGG CTGGCGCGGC
GCGCGCATCG AGAACATCCA GCAGTTCTCC AGCGACTTCC CCGACACCCA GCTGATCCGC
CTGGAGCAGA ACTACCGCTC CACCGCCGGC ATCCTGAAAG CTGCCAACGC GCTGATCGCC
AACAACAACG GACGCCTCGG CAAGGAGCTG TGGACCGACG GTGGCGACGG CGAGCCGCTG
GCCCTGTACG CCGCCTTCAA CGAACACGAC GAAGCACGCT ACGTGGTCGA AAGCATCGAG
GACGCCCTGC GCAAGGACGG CCTCAAGCGC AGCGAGATCG CCATTCTGTA TCGCTCCAAC
GCCCAGTCGC GGGTGCTGGA AGAGGCGCTG CTGCGCGAGC GCATTCCCTA CCGCATCTAC
GGCGGCCAGC GCTTCTTCGA GCGCGCCGAG ATCAAGAACG CCATGGCCTA TCTGCGCCTG
CTCGACGGGC GCGGCAACGA CGCGGCGCTG GAGCGCATCG TCAACGTGCC GGCACGCGGC
ATCGGCGAGA AGACGGTCGA GAGCATCCGC GAGTTCGCCC GCGCCCAGGA CCTCTCCATG
TGGGAGGCGA TCCGCCGCAT GCTCGCCGTC AAGGCGCTGC CCGGCCGTGC CGCCGGCGCG
CTGGGTGGCT TCATCGAGCT GATCGAAGGC CTGGCCGAGA AGGTTATGGC CATGCCCCTG
CACCAGATGA CCCAGGTGGT CATCGAGCAG AGCGGCCTGC TCGCCTATCA CGAGGCGGAA
AAGGGCGAGA AGGGCCAGGC ACGGGTGGAG AACCTGGAGG AATTGGTCAG CGCCGCGCGC
GCCTTCGAGA ACGACGAAGA CGACGAGCTG ACCCCGCTGC AGGCCTTCCT CACCCACGCC
TCGCTGGAGG CCGGGGACAC CCAGGCCGCC GAGAACGAGG ACAGCATTCA ACTGATGACC
CTGCACAGCG CCAAGGGCCT GGAATTCCCC CTGGTGTTCC TGGTTGGCAT GGAGGAGGGT
CTGTTCCCGC ACAAGATGAG CCTGGAAGAA CCGGGCCGAC TGGAAGAAGA ACGCCGCCTG
GCCTATGTCG GCATTACCCG TGCCATGCAG AAGCTGGTGA TCAGCTACGC CGAAACCCGG
CGTCTCTACG GTAGCGAGAC CTACAACAAG GTGTCGCGCT TCGTCCGCGA AATCCCCGCA
CCGCTGATTC AGGAAGTGCG TCTGAGCAAC AGCGTCAGCC GTCCGGTGAG CACCAGCTCG
ATGAGCGGTG GCAGCCTGTT CGCCGGCAGC GCCGTGCCGC AGACACCCTT CAACCTGGGT
CAACGGGTAC GCCACAGCCT GTTCGGCGAG GGCACCATTC TCAACTTCGA GGGTGCCGGC
GCCCAGGCAC GGGTGCAGGT GAATTTTGAA AACGAAGGCA GCAAGTGGCT GATGTTGGCG
TACGCCAAGC TGGAAGCCTG TTAG
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| Protein sequence | MQNDPELLLA SLNDAQVQAV AAPLGRQLVL AGAGSGKTRV LVHRIAFLIQ AMGASPHSIL
SVTFTNKAAA EMRHRIEQML GHNPAGMWVG TFHGLAHRLL RAHWQEAALT ENFQILDSDD
QQRLIKRVIR ELGLDEQRWP AKQAQWFING QKDEGFRPQH IQAGGDLFLA TMRGIYEAYE
AACARTGVID FSELLLRALD LWRDKPGLLE HYQRRFRHIL VDEFQDTNAV QYAWLRLLAK
GGDSLMVVGD DDQSIYGWRG ARIENIQQFS SDFPDTQLIR LEQNYRSTAG ILKAANALIA
NNNGRLGKEL WTDGGDGEPL ALYAAFNEHD EARYVVESIE DALRKDGLKR SEIAILYRSN
AQSRVLEEAL LRERIPYRIY GGQRFFERAE IKNAMAYLRL LDGRGNDAAL ERIVNVPARG
IGEKTVESIR EFARAQDLSM WEAIRRMLAV KALPGRAAGA LGGFIELIEG LAEKVMAMPL
HQMTQVVIEQ SGLLAYHEAE KGEKGQARVE NLEELVSAAR AFENDEDDEL TPLQAFLTHA
SLEAGDTQAA ENEDSIQLMT LHSAKGLEFP LVFLVGMEEG LFPHKMSLEE PGRLEEERRL
AYVGITRAMQ KLVISYAETR RLYGSETYNK VSRFVREIPA PLIQEVRLSN SVSRPVSTSS
MSGGSLFAGS AVPQTPFNLG QRVRHSLFGE GTILNFEGAG AQARVQVNFE NEGSKWLMLA
YAKLEAC
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