Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4510 |
Symbol | |
ID | 5106968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4942902 |
End bp | 4945505 |
Gene Length | 2604 bp |
Protein Length | 867 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640505781 |
Product | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
Protein accession | YP_001189989 |
Protein GI | 146309524 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein [TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.531112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTTC ACACCAGGCG CCCGCATTTC CCGCGACTGT CCACCGCCAG CCTGTCGCTG CTGGCACTCT CCATCGCCTG CGCCGGCCTG CCGCTGGCCC ATGCCGCCGA GCCGACGCCG GCGACGCAGC AGCACAACCA GGGCGGTTAC CACTTCGCCA TCGAGCGCCA GCCACTGGTC TCGGCGCTGA ACAGCTTCAG CGACATCACC GGCTGGCAGG TGGGCCTGCC GGCGCAACTG GCCGATGGCG TCTATTCTCC CGGCACCAGC GGGCGCCTTT CCGCAGAGCT GGCCCTGGCG CGTCTGCTCG AAGGCACCGG CCTGAGCTAC CGCAGCGTCG GCGAGCGCAG CGTGATTCTG GTACGCAACC CCAGCCAGTC CATCGCCCTG CAGCCGATGA CGGTCACCGC CACGCGCCGC GAACAGAGCG TCAGCGAGGT GCCCAGCTCG GTCAGCGTGC TCGGCCGCGA GCAGCTCGAC CGGCAGAACG TGGAGGACAT CCAGGACCTG GTGCGCTACG AACCCGGCGT CTCCGTCGGC GGCACCGGCC AGCGCGCCGG CCTCACCGGC TACAACATCC GCGGCATCGA CGGTAACCGC GTGCTGACGC AGATCGACGG CGTGGAAATA CCGGCCAGCT TCTTCTACGG CCCCTACGCC CAGACCCATC GCAACTATGT CGACCCGGAA ATCGTCAAGC GCGTGGAAAT CCTCCGCGGC CCGGCCTCGG CCCTGTATGG CAGCAGCGCC ATCGGTGGTG CGGTGAGCTA CTTCACCCTG GATGCCGACG ACATCATCAA GAACGGCCGG GAGGTCGGCG CGCGCCTGAA GACCGGCTAC AGCTCGGCCG ACGACAGCTG GCTCAAGTCG GCGACGCTGG CCGGCCGTCA CGAACAGTTC GACGCCCTGC TGCACCTGTC CCGGCGCGAC GGCCATGAGA CCGAATCCTA CGGCGACACC GGCGGCAGCG GCCTGAATCG CACCCGGGCC AACCCCGAGG ACGTGCGCAC CACCAACCTG CTGGCCAAGC TGGGCTGGAA CTACAACGAC AGCGACCGCC TGCAACTGAC CTACGAGAAA TACAAGGACG ACCGCGACAG CAACCAGCTG AGCGCCGTCG GCGGGCCGTT CAATGCCGGC AGCGGCTTCG GCTACTACCG CTCGCGCAAC GCCAACGACA CCATCACCCG CGAGCGTTTC GGCCTGGAAC ATCGCCTGGC GCTGCACAGC CCGGTGGCCG ACACGCTGAA ATGGAGCCTG AACTACCAGT TGGCCAAGAC CGACCAGAGC ACGGTGGAAA ACTACGTTCC CACCAACTTC TTCACCGGCG CGGTGACCCG CGACGTCATG CGCTATCGGG ACACCTACTA CAAGGATCGT CAGTGGCTGT TCGATGCGCA GCTGGACAAG GCCTTCGCCC TGGGCGCCAC CGACCACCTG CTGACCTATG GTCTGACCCT CAAGCATCAG GAGGTGCGCG GCCTGCGCAC CGGCTACGGC ATCTGCAACG CCGCCATCGG CGCCGCCTGC AGCGGCGGCG TCGGCTCGCC GAGCAGCAAC GCCAGCGACA ACCTGACGCC GCAGAGCGAT TTCCCCGACC CAACCGTCAA GACCTATGCC CTGTTCCTGC AGGACGACAT TCGCTGGGAC CAGTGGACCT TCCTGCCGGG CCTGCGCTAT GACCGCACCC ACCTCGATCC GACGATCACC GAGCGCTACC AGGCCACCGC CATCGGCGGC GGCAGCGAAC CCAGCGGCGC AAGCCGAACC TGGCAGCGCG TCTCGCCCAA GCTCGGCGTC ACCTATGCCT TCGATGATCA CTACACCTGG TTCGGCCAGT ACGCCGAGGG CTTCCGCACG CCGACGGCCA AGGAAATGTA CGGGCGTTTC CAGAACTCCA ACCCGTCCTA CATCGTCGAG CCCAACCCGG ATCTCGACCC GGAGAAGAGC CGCGGCCTGG AGACCGGCCT GCGCGGCAAC TTCGCCAGTG GCAGCTTCGA CCTGGCGCTG TTCTACAACC GCTACCGCGA CTTCCTCGAC GAAGACGCCG CTGGCAGCCG CGGCGCCATC CCCGTGTTCC AGAGCCGGAA CGTCAGCCGT GCCAGCATCC GCGGCGTCGA ACTGAAAGGC CGTCTCGATC TGGACAGCTT CGGCGCCATG GACGGCCTGT ACACCCAAGG CTCCATCGCC TACGCCCGCG GTCGCAACGA GGAAACCGGC GAAGCGCTCA ACAGCATCAA CCCGCTGACC GGCGTGTTCG GCCTGGGCTA CGAGCAGGAG CGGTTCGGCG CCCTGCTGAG CTGGACCCTG GTCAAGCGCA AGACGCGCAT CGACGACAGC AGCTTCAACA GCCCCGACGG CAGCGGCAGC CAGTTCGCCA GCCCCGGCTA CGGCATCCTC GATCTGACCG GCCATTACCG ACTGAGCGAC GACCTGACCG TCAACGCCGG CCTGTACAAC CTGACCGACA AGAAATACTG GTTGTGGGAT GACGTGCGCG GCTACGACGA CGTTGGCGAA GCAGGCGTGA CCAGCCCAGC CAACCTCGAC CGCCTGACCC AGCCGGGGCG CAACGTCTCG ATCAACCTGG TCTGGGACAT CTGA
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Protein sequence | MPLHTRRPHF PRLSTASLSL LALSIACAGL PLAHAAEPTP ATQQHNQGGY HFAIERQPLV SALNSFSDIT GWQVGLPAQL ADGVYSPGTS GRLSAELALA RLLEGTGLSY RSVGERSVIL VRNPSQSIAL QPMTVTATRR EQSVSEVPSS VSVLGREQLD RQNVEDIQDL VRYEPGVSVG GTGQRAGLTG YNIRGIDGNR VLTQIDGVEI PASFFYGPYA QTHRNYVDPE IVKRVEILRG PASALYGSSA IGGAVSYFTL DADDIIKNGR EVGARLKTGY SSADDSWLKS ATLAGRHEQF DALLHLSRRD GHETESYGDT GGSGLNRTRA NPEDVRTTNL LAKLGWNYND SDRLQLTYEK YKDDRDSNQL SAVGGPFNAG SGFGYYRSRN ANDTITRERF GLEHRLALHS PVADTLKWSL NYQLAKTDQS TVENYVPTNF FTGAVTRDVM RYRDTYYKDR QWLFDAQLDK AFALGATDHL LTYGLTLKHQ EVRGLRTGYG ICNAAIGAAC SGGVGSPSSN ASDNLTPQSD FPDPTVKTYA LFLQDDIRWD QWTFLPGLRY DRTHLDPTIT ERYQATAIGG GSEPSGASRT WQRVSPKLGV TYAFDDHYTW FGQYAEGFRT PTAKEMYGRF QNSNPSYIVE PNPDLDPEKS RGLETGLRGN FASGSFDLAL FYNRYRDFLD EDAAGSRGAI PVFQSRNVSR ASIRGVELKG RLDLDSFGAM DGLYTQGSIA YARGRNEETG EALNSINPLT GVFGLGYEQE RFGALLSWTL VKRKTRIDDS SFNSPDGSGS QFASPGYGIL DLTGHYRLSD DLTVNAGLYN LTDKKYWLWD DVRGYDDVGE AGVTSPANLD RLTQPGRNVS INLVWDI
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