| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4505 |
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| Symbol | |
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| ID | 5106963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4938934 |
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| End bp | 4939704 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505776 |
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| Product | NLPA lipoprotein |
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| Protein accession | YP_001189984 |
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| Protein GI | 146309519 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC TGCTGACTGC CCTGGCCGCC TTCGCGGCCT TCTCGGCCCA GGCCGAAACC
CTCAACATCG CCGCTACTCC GGTACCGCAC GCGGAGATCC TGGAAGTGGT CAAGCCGCTG
CTGGCCAAAG AAGGCGTGGA GCTGAAGGTG CGCGTGTTCA CCGACTACGT GCAGCCCAAC
CTGCAGGTGC AGCAGAAGAA CCTCGACGCC AACTTCTTCC AGCACCAGCC GTACCTGGAC
GAGTTCAACG CCAGCCGCAA GACCGAGCTG GTCAGCGTGG TCGGTGTGCA CGTCGAGCCC
TTTGGTGCCT ACTCGAGCAA GCACAAGAAC CTGAGCGAGC TGCCGCAGGG CGCCACCGTG
GCCATCCCCA ACGACGCCAC CAACGGCGGC CGTGCCCTGC TGCTGCTGCA GCAGGCCGGG
GTGATCAAGC TCAAGCCGGA AGCCGGCATC CTCGCCACGC CCAAGGACAT CGCCGAGAAC
CCCAAGGCGA TCAAGGTGCG TGAACTGGAA GCGGCCACCC TGCCGCGCGT GCTGAGCCAG
GTCGACGCTG CCCTGATCAA CACCAACTAC GCCCTCGAGG CCAAGCTGAA CCCGACCCAG
GACGCCCTGG CCATCGAGGG CAGCGACTCG CCGTACGTCA ACCTGCTGGT CGCCCGTCCG
GACAACAAGG ACAGCGACGC CATGCAGAAG CTGGCCAAAG CGCTGAACAG CGCCGAGGTG
AAGCAGTTCA TCGAAGAGAA GTACAAAGGT GCCGTCGTCC CGGCGTTCTG A
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| Protein sequence | MKKLLTALAA FAAFSAQAET LNIAATPVPH AEILEVVKPL LAKEGVELKV RVFTDYVQPN
LQVQQKNLDA NFFQHQPYLD EFNASRKTEL VSVVGVHVEP FGAYSSKHKN LSELPQGATV
AIPNDATNGG RALLLLQQAG VIKLKPEAGI LATPKDIAEN PKAIKVRELE AATLPRVLSQ
VDAALINTNY ALEAKLNPTQ DALAIEGSDS PYVNLLVARP DNKDSDAMQK LAKALNSAEV
KQFIEEKYKG AVVPAF
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