Gene Pmen_4498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4498 
Symbol 
ID5106956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4932480 
End bp4933268 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID640505769 
ProductABC-3 protein 
Protein accessionYP_001189977 
Protein GI146309512 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACT TTCTGATCAA CGCCCTGCTC GCCGGCCTGG CGCTGGCCCT GGTGGCCGGC 
CCGCTCGGCT CCTTCGTAGT GTGGCGGCGC ATGGCCTATT TTGGCGACAC CCTGTCCCAC
GCCGCCCTGC TCGGCGTGGC GCTGGGCCTG ATGCTGGACG TCAACCCGAC GCTGGCGGTG
ACCGTCGGCT GCGTGCTGCT CGCCGTGCTG CTGGTGACCC TGCAGCAGCG CCAGCCGCTG
GCCTCCGACA CGCTGCTGGG CATCCTCGCG CACAGCACCC TGTCGCTGGG TCTGGTGGTG
CTGAGTTTCA TGCAGGAAGT GCGCATTGAC CTGATGGGCT ACCTGTTCGG CGACCTGCTC
GCGGTCAGCC CCAGCGACCT GGCCTGGATC ATCGGCGGCA GCGCGCTGGT GCTGGCCCTG
CTGACCTGGC TGTGGCGACC GCTGCTGGCG ATCACCGTGC ACGAGGAGCT GGCGCGGGTC
GAAGGCCTGC CGGTGGCGGC GATTCGCCTG GCCCTGATGC TGCTGATCGC GGTGGTGATC
GCGGTGGCGA TGAAGATCGT CGGCGTGCTG CTGATTACCT CGCTGCTGAT CATCCCTGCC
GCCGCCGCCC AGCGCCACGC GCGCACGCCG GAGCAGATGG CCGTGGGCGC CAGCCTGCTC
GGGCTGGTGG CGGTGTGCGC GGGCCTCGCC ATGTCCTGGT ACCAGGACAC GCCGGCCGGG
CCGTCCATCG TGGTCAGCGC CGCGGCGCTG TTTCTGGCCA GTTTTGCCCT GCCCAAGCGC
AGCGCCTGA
 
Protein sequence
MPDFLINALL AGLALALVAG PLGSFVVWRR MAYFGDTLSH AALLGVALGL MLDVNPTLAV 
TVGCVLLAVL LVTLQQRQPL ASDTLLGILA HSTLSLGLVV LSFMQEVRID LMGYLFGDLL
AVSPSDLAWI IGGSALVLAL LTWLWRPLLA ITVHEELARV EGLPVAAIRL ALMLLIAVVI
AVAMKIVGVL LITSLLIIPA AAAQRHARTP EQMAVGASLL GLVAVCAGLA MSWYQDTPAG
PSIVVSAAAL FLASFALPKR SA