Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4498 |
Symbol | |
ID | 5106956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4932480 |
End bp | 4933268 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640505769 |
Product | ABC-3 protein |
Protein accession | YP_001189977 |
Protein GI | 146309512 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACT TTCTGATCAA CGCCCTGCTC GCCGGCCTGG CGCTGGCCCT GGTGGCCGGC CCGCTCGGCT CCTTCGTAGT GTGGCGGCGC ATGGCCTATT TTGGCGACAC CCTGTCCCAC GCCGCCCTGC TCGGCGTGGC GCTGGGCCTG ATGCTGGACG TCAACCCGAC GCTGGCGGTG ACCGTCGGCT GCGTGCTGCT CGCCGTGCTG CTGGTGACCC TGCAGCAGCG CCAGCCGCTG GCCTCCGACA CGCTGCTGGG CATCCTCGCG CACAGCACCC TGTCGCTGGG TCTGGTGGTG CTGAGTTTCA TGCAGGAAGT GCGCATTGAC CTGATGGGCT ACCTGTTCGG CGACCTGCTC GCGGTCAGCC CCAGCGACCT GGCCTGGATC ATCGGCGGCA GCGCGCTGGT GCTGGCCCTG CTGACCTGGC TGTGGCGACC GCTGCTGGCG ATCACCGTGC ACGAGGAGCT GGCGCGGGTC GAAGGCCTGC CGGTGGCGGC GATTCGCCTG GCCCTGATGC TGCTGATCGC GGTGGTGATC GCGGTGGCGA TGAAGATCGT CGGCGTGCTG CTGATTACCT CGCTGCTGAT CATCCCTGCC GCCGCCGCCC AGCGCCACGC GCGCACGCCG GAGCAGATGG CCGTGGGCGC CAGCCTGCTC GGGCTGGTGG CGGTGTGCGC GGGCCTCGCC ATGTCCTGGT ACCAGGACAC GCCGGCCGGG CCGTCCATCG TGGTCAGCGC CGCGGCGCTG TTTCTGGCCA GTTTTGCCCT GCCCAAGCGC AGCGCCTGA
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Protein sequence | MPDFLINALL AGLALALVAG PLGSFVVWRR MAYFGDTLSH AALLGVALGL MLDVNPTLAV TVGCVLLAVL LVTLQQRQPL ASDTLLGILA HSTLSLGLVV LSFMQEVRID LMGYLFGDLL AVSPSDLAWI IGGSALVLAL LTWLWRPLLA ITVHEELARV EGLPVAAIRL ALMLLIAVVI AVAMKIVGVL LITSLLIIPA AAAQRHARTP EQMAVGASLL GLVAVCAGLA MSWYQDTPAG PSIVVSAAAL FLASFALPKR SA
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