| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4489 |
|---|
| Symbol | |
|---|
| ID | 5107184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 4922628 |
|---|
| End bp | 4923494 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640505760 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001189968 |
|---|
| Protein GI | 146309503 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.447001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGATT CACAATCACG GATGAGTGCC ATGGAAAAGC CGATCCAATC CCCATTTGAG
CAGGCCCCCA ACCCTCACCT GCGCTGTGTG ATTCTTGAGG CCACTGCCGA CCCGGATTTG
CATCGATGGC TCTACCAGCT CGCACCGGAT GGCATTCCGC AATGGGCTCC ACTGTTCCTT
GATACGCCCT ACCATTCGCT GGCCGATCAA GGGCCAGCGC TGGTCATGAG CAACACCTCG
GATCAGTGGA GTGACTATGC CAACGCTCTT TTGTCCCAGA GCGATGCCGG CTGCATCCTT
TATCTCGAGA GCGCTCAGCA CTGGCAAGCG GCGATAGAAC ATTGCCAGAG CCTGCTTTCC
GTTCGTACAG AAGAACACCC AGACCAGTTG ATGCGCTTCT TTGAGCCGCG CTGGCTTGAA
CCGCTACTCA TGGCCCTGAG CGAAGGAGAG AAACAGGCAT TCCTGGGTCC GTTCTCCGGA
TTGGCCTGGC GCAACGAGTT GGGATGGCGC TACACCGAGC GTAACCAACC TTGGGACGGA
ACGGTGCAAG AACCAGGTTG GCTGTGGCTG GGGCAGCAGC GCCGCCAGGA AATGGAAAGA
GCACGCCTCA GACTGTTGGC AGCCGAGATG GCCGAAGGCT ATCGCAGCGT AATCGATAGC
TCACCCGCCG AAGAGTTCGT CTTCACTCAG CTATCGAACG CGTATGCAGC GGGCGTTACC
CAGAAAGCCC AGTACGAACG CTGGTTACGA TTGACGCTGA GCCAAGGCAC GCAGTTCTGG
CAGTCAAAAC CTGTCAACAG CATCCTGGCG CGCCAGGATC TCGCGATCAG CACAAAACTG
GATGAGCTGG AAAGTCTTTC AAGCTGA
|
|---|
| Protein sequence | MHDSQSRMSA MEKPIQSPFE QAPNPHLRCV ILEATADPDL HRWLYQLAPD GIPQWAPLFL
DTPYHSLADQ GPALVMSNTS DQWSDYANAL LSQSDAGCIL YLESAQHWQA AIEHCQSLLS
VRTEEHPDQL MRFFEPRWLE PLLMALSEGE KQAFLGPFSG LAWRNELGWR YTERNQPWDG
TVQEPGWLWL GQQRRQEMER ARLRLLAAEM AEGYRSVIDS SPAEEFVFTQ LSNAYAAGVT
QKAQYERWLR LTLSQGTQFW QSKPVNSILA RQDLAISTKL DELESLSS
|
|---|
| |