| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4480 |
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| Symbol | |
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| ID | 5107175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4911330 |
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| End bp | 4912292 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505751 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001189959 |
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| Protein GI | 146309494 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.678379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAA CCCTGCTGCG CATGACCCTG CGCCAGCTTC AGGTATTCCG CGCCGTGTGC
GAACACGGCT CCTACAGCCG CGCCGCAGAC GAAATGGCGC TGACCCAGCC GGCGGTCAGC
CTGCAGATCC GCCAGCTGGA GGAGCTGGTC GGCCAGCCGC TGTTCGAATA CGTCGGCAAG
AAGCTCTATT TGACCGAGGC GGCCGAAGCG CTCAGGCGCG CCAGCAGCGA TATCTTCGGC
CGCCTGGAGA GCCTGGACAT GCAGCTGTCG GACCTGCAGG GTTCGCTGCA GGGGCAGCTC
AACCTGTGCG TGGAATCCAG CGCGAAGTAT TTCGTACCTC ACCTGTTCGC CGAATTTCGC
CGCCATTACC CCGAAGTCAG CCTGAATCTC ACGGTGGTCA ATCACGCCTT GGTGGTGCGC
CGCCTGACCC TGAGCCGCGA CGACCTGATG ATCATGAGCC AGGTGCCACA GGACATGGCG
CTGGACTTCA TGCCCTTTCT CAACAACCCC ATCGTGGCCG TGGCGGCGCC GGATCATCCG
CTGTGTTCGC AGCAGACGCT GCAGCTGCAG GATCTGACCG CCCATGCGCT GCTGATCCGC
GAGAGCGGCT CGGGCACCCG CCGCGCCTGC GAGGAGTACT GCAACCAGAA GCGCGCCCAC
TTTGCCCAGA CGCTGGAGAT CGGCTCACTG GATGCCCAGC GCGAGGCAGC GATCGCCGGG
CTCGGCCTGG CCCTGCTGCC GCGCCATGCG GTACGCCTGG AGCTGGAGCA CGGCCTGCTG
CGCGAGCTGC CGGTGGCGGA GCTGCCACTG CAGCGCAGCT GGTGCGTGGT GAATATCCGC
GGACGGCGCC TGTCGCCAGT GGCGCAGGCC TTCGTCGATT TCATCCGCAG CGAGCGCCCG
ACCATCGTCC GCCTGGCCGA GCGTTTCGCA GGATCGGGCA AGAATCTCGC AGGATCGGCC
TAA
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| Protein sequence | MRKTLLRMTL RQLQVFRAVC EHGSYSRAAD EMALTQPAVS LQIRQLEELV GQPLFEYVGK
KLYLTEAAEA LRRASSDIFG RLESLDMQLS DLQGSLQGQL NLCVESSAKY FVPHLFAEFR
RHYPEVSLNL TVVNHALVVR RLTLSRDDLM IMSQVPQDMA LDFMPFLNNP IVAVAAPDHP
LCSQQTLQLQ DLTAHALLIR ESGSGTRRAC EEYCNQKRAH FAQTLEIGSL DAQREAAIAG
LGLALLPRHA VRLELEHGLL RELPVAELPL QRSWCVVNIR GRRLSPVAQA FVDFIRSERP
TIVRLAERFA GSGKNLAGSA
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