| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4479 |
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| Symbol | |
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| ID | 5107174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4909762 |
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| End bp | 4911177 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505750 |
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| Product | pyruvate carboxylase subunit A |
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| Protein accession | YP_001189958 |
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| Protein GI | 146309493 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0439] Biotin carboxylase |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.841815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAAGA AGATCCTGAT CGCCAACCGT GGTGAAATTG CCGTCCGTAT CGTGCGGGCC
TGTGCCGAAA TGGGCATTCG CTCAGTGGCC ATCTATTCCG AGGCGGACCG CCACGCCCTG
CACGTCAAGC GTGCCGACGA GGCGCACAGC ATCGGCGACG ACCCCCTGGC CGGCTACCTG
AACCCGCGCA AGCTGGTCAA TCTGGCCGTG GAGACCGGCT GCGATGCCCT TCATCCGGGC
TACGGTTTTC TCTCTGAAAA CGCCGAACTG GCTGAGATCT GCGCCGAACG TGGGGTCAAG
TTCATCGGGC CGTCGGCCGA GGTGATTCGC CGCATGGGCG ACAAGACCGA GGCGCGGCGC
AGCATGATCA AGGCTGGCGT GCCGGTCACC CCGGGTACTG AAGGCAACGT CGCCGACCTC
GACGAGGCGC TGCGTGAAGC CGAGCGTATC GGCTACCCGG TGATGCTCAA GGCCACCTCC
GGCGGCGGTG GCCGCGGCAT TCGCCGCTGC AACAGCCGCG AGGACCTGGA GCAGGCCTAT
CCGCGGGTGA TCTCCGAGGC CACCAAGGCC TTCGGCAGCG CGGAAGTCTT CCTGGAAAAG
TGCATCGTCA ATCCCAAGCA TATCGAGGCG CAGGTGCTGG CCGACAGCTT CGGCAATACC
GTGCACCTGT ACGAGCGCGA CTGCTCCATC CAGCGCCGCA ACCAGAAGCT CATCGAGATC
GCCCCCAGCC CGCAGCTGAC CCCCGAGCAG CGCGCCTATA TCGGCGACCT GGCGGTGCGC
GCCGCGCAGG CGGTGGGCTA CGAGAACGCC GGCACCGTGG AGTTCCTGCT CGCCGAGGGC
GAGGTGTACT TCATGGAGAT GAACACCCGG GTGCAGGTGG AGCACACCAT CACCGAGGAA
ATCACCGGCA TCGACATCGT CCGCGAGCAG ATTCGCATCG CCAGCGGTCA GCCGCTGTCG
ATCAAGCAGG AAGACATCAT CCACCGTGGT TATGCCCTGC AGTTCCGCAT CAACGCCGAG
GACCCGAAGA ACAACTTCCT GCCGTCCTTC GGCAAGATCA CCCGCTACTA CGCCCCCGGC
GGCCCCGGCG TGCGGACCGA CACGGCGATC TACACCGGCT ACACCATTCC GCCCTACTAC
GATTCGATGT GCCTGAAGCT GATCGTCTGG GCACTGACCT GGGAAGAGGC GATGGACCGC
GGCCTGCGCG CGCTGGACGA CATGCGCGTG CAGGGCGTGC GCACCACCGC GCCGTATTAC
CAGGAAATCC TGCGCAACCC GGAGTTTCGC AGCGGTCAGT TCAACACCAG CTTCGTCGAG
AGCCATCCGG AGCTGACCCA GTACTCGATC AAGCGCAACC CGTCGCACCT GGCCATCGCC
ATCGCCACCG CCATTGCGGC CCACGCCGGC CTGTAG
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| Protein sequence | MIKKILIANR GEIAVRIVRA CAEMGIRSVA IYSEADRHAL HVKRADEAHS IGDDPLAGYL
NPRKLVNLAV ETGCDALHPG YGFLSENAEL AEICAERGVK FIGPSAEVIR RMGDKTEARR
SMIKAGVPVT PGTEGNVADL DEALREAERI GYPVMLKATS GGGGRGIRRC NSREDLEQAY
PRVISEATKA FGSAEVFLEK CIVNPKHIEA QVLADSFGNT VHLYERDCSI QRRNQKLIEI
APSPQLTPEQ RAYIGDLAVR AAQAVGYENA GTVEFLLAEG EVYFMEMNTR VQVEHTITEE
ITGIDIVREQ IRIASGQPLS IKQEDIIHRG YALQFRINAE DPKNNFLPSF GKITRYYAPG
GPGVRTDTAI YTGYTIPPYY DSMCLKLIVW ALTWEEAMDR GLRALDDMRV QGVRTTAPYY
QEILRNPEFR SGQFNTSFVE SHPELTQYSI KRNPSHLAIA IATAIAAHAG L
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