| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4474 |
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| Symbol | |
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| ID | 5107169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4904381 |
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| End bp | 4905328 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505745 |
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| Product | ribokinase-like domain-containing protein |
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| Protein accession | YP_001189953 |
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| Protein GI | 146309488 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.491556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTGG TCTGTGGCGA AGCGCTGTTC GACGTGTTCA TCCAGAGCGA CGGCGCGCGC
AGTAATGAGC TGGCCTTCAA GGCCATCGCC GGCGGTTCGC CGTTCAATGT GGCGCTGGGC
CTGAGACGCC TGGGCAGTGA TGCGGCGCTG TTCACCGGGA TCTCCTCGGA CAGCCTCGGC
CAGCGCCTGC GCCAGGTGCT GCGTGAAGAA GGCGTGAGCG ATGCCTACCT GATCGCCAGC
GATGCGCCGA CCACCCTGGC CATGGTCGGC CTGGACGCGG CCGGTTCGCC GCACTACAGC
TTCCGTGGCG AAGGCTGCGC CGACCGCCAG CTGCGCGCCG AGCACCTGCC GACCCTGGAT
GCGCGGGTAC GCGGCCTGCA TGTCGGCTCC TTCTCGCTGG TGGTGGAGCC GGTGGCCGAG
ACGCTGCTGA CGCTGGTGCA GCGCGAGCAT CAGCAACGCC TGATCAGCCT CGATCCCAAC
GTGCGTCTCG GCCCCGCGCC GGATATCGCC CGCTGGCGCG AGCGCGTCGA GACCTTCGCC
GGCTATGCCC ATCTGATCAA GGTCAGCGAG GAAGATCTGC AGGTGCTCTA TCCCGAGCGC
GACCCGCAGC AGGTCGCAGT GGGCTGGCTT AACGAGCGCT GCCAACTGGT GTTCCTCACC
AAGGGCAGCA AAGGCGCCAG CGTCCATAGC CGCCACGGCC ACTGGTCGGC GCCGGCGATG
GCCGTAGCCA CCCGCGACAC CGTCGGCGCC GGCGATACCT TCCAGGCCGC GCTGCTCAGC
TACCTGGCCC GCCACGAGCT GGACAGCCCC GAAGCGCTGG CGACGCTGAG CCAGGAGCAG
ATCGACGACA TGTTGCATCT GGCCATCGAG GCTGCCGCGC TGACCTGCGC CCGGGTCGGG
CCCGACCTGC CCTACCTGCA CGAGCTGGAG CGGCAAAGCG CGCGCTGA
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| Protein sequence | MYLVCGEALF DVFIQSDGAR SNELAFKAIA GGSPFNVALG LRRLGSDAAL FTGISSDSLG
QRLRQVLREE GVSDAYLIAS DAPTTLAMVG LDAAGSPHYS FRGEGCADRQ LRAEHLPTLD
ARVRGLHVGS FSLVVEPVAE TLLTLVQREH QQRLISLDPN VRLGPAPDIA RWRERVETFA
GYAHLIKVSE EDLQVLYPER DPQQVAVGWL NERCQLVFLT KGSKGASVHS RHGHWSAPAM
AVATRDTVGA GDTFQAALLS YLARHELDSP EALATLSQEQ IDDMLHLAIE AAALTCARVG
PDLPYLHELE RQSAR
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