Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4469 |
Symbol | |
ID | 5107164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4898452 |
End bp | 4899387 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640505740 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001189948 |
Protein GI | 146309483 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCTT CGGCCATCAA TACTCCTGCT GCCGCGCAGG TCAGCACGCC AGGCGGGCGC AAGCCCCGGC GTCTGGCGCC GGGCTGGTTT CTGGTCAGCC CCTCGGTGGC CCTGCTGCTG ATCTGGATGA TCGTGCCGCT GGGCATGACC ATCTACTTCT CGCTGATCCG CTACAACCTG CTCTACCCCG GCGAGAACGA TTTTGTCGGT CTGGAGAACT TCGAATACTT CGTCACCGAC GCCGCCTTTC TCTCTGGCGC CGGCAACACC CTGCTGCTGG TGGGCAGCGT GCTGTTGATC AGCGTGGTGT TCGGCGTGCT GATCTCCGCC CTGCTGGAGG CCAGCGAGTT TCTTGGCCGC GGCATCGTTC GGGTGCTGCT GATCTCGCCG TTCTTCATCA TGCCCACGGT CAGCGCGCTG CTGTGGAAGA ACCTGATCTT CCATCCGGTA TCGGGGATTC TCGCTGCGGT GTGGCAGTTC TTCGGCGCCC AGCCGGTGGA CTGGCTGGCG CACCACCCGC TGCTGTCGAT CATCCTGATC GTGTCCTGGC AGTGGCTGCC ATTCGCCATC CTGATCCTCA TGACCGCCAT GCAGTCGCTG GATCAGGAGC AGAAGGAAGC CGCGCGCCTC GACGGCGCCG GCCCCATCGC CATCTTCTGG CACCTGACCC TGCCGCACCT GGCGCGGCCG ATCGCGGTGT TGGTGATGAT CGAGACCATC TTCCTGCTCT CGGTATTCGC CGAGATCTAC ACCACCACCA GCGGCGGCCC CGGCTACGAG TCGACCAACC TCGCCTACCT GATCTACAAC CAGGCGCTGC TGCAGTTCGA CGTCGGCATG GCCTCGGCGG GCGGGCTGAT CGCGGTGGTC ATCGCCAACA TCGCCGCCAT CGTGCTGATC CGCATGATCG GCAAGAACCT GACCGCGCGG CAGTGA
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Protein sequence | MNSSAINTPA AAQVSTPGGR KPRRLAPGWF LVSPSVALLL IWMIVPLGMT IYFSLIRYNL LYPGENDFVG LENFEYFVTD AAFLSGAGNT LLLVGSVLLI SVVFGVLISA LLEASEFLGR GIVRVLLISP FFIMPTVSAL LWKNLIFHPV SGILAAVWQF FGAQPVDWLA HHPLLSIILI VSWQWLPFAI LILMTAMQSL DQEQKEAARL DGAGPIAIFW HLTLPHLARP IAVLVMIETI FLLSVFAEIY TTTSGGPGYE STNLAYLIYN QALLQFDVGM ASAGGLIAVV IANIAAIVLI RMIGKNLTAR Q
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