| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4466 |
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| Symbol | |
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| ID | 5107161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4894629 |
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| End bp | 4895690 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505737 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001189945 |
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| Protein GI | 146309480 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1533] DNA repair photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCC CTGTTCCGCC GCGCGGCCGC GGCACCGCCA GCAACCCGCA CAACCGCTAC
GCACCGACCC GCTCGGTGGC GCAGGACGAT GGCTGGTATC AGGAGGAAAC CCCGCCCAGC
CGGGCCACCG AGGTGCGGCG CGAGCTGGCG AAAACGGCCA TCACCCGCAA CAAGTCGCCG
GACGTCGGCT TCGATCGCTC GGTCAATCCC TACCGCGGCT GTGAACATGG CTGCATCTAC
TGTTTCGCCC GCCCCAGCCA TGCCTACTGG GACCTGTCGC CAGGCATCGA CTTCGAGACC
CGCCTGATCG CCAAGACCAA CCTGGCCGAC CGTCTCGAGG AACAGCTGCA GAAACCCGGC
TACGTGCCGC AGCCCATCGC CCTGGGCATC AACACCGATG CCTATCAGCC GATCGAGCGC
GAACAGCGCC TGACCCGCCA GGCCCTGGAG ATTCTGCTGC GCTACAGGCA CCCGCTGCAC
ATCATCACCA AGAGCTCGCT GATCCTGCGC GACCTCGACC TGCTCAGCGA GCTGGCCAGC
CACAACCTGG TCAGCGTGGC CTTCAGCCTG ACCACCCTGG ACGACGAGCT GAAACGCATC
ATGGAGCCGC GCACCGCGGC GCCGGCCGCC CGTCTGCGCG CCATGCGCAC GCTGCACGAA
GCCGGGGTGC CGGTGAGCGT GATGTGCGCG CCGATGATCC CGATGATCAA CGACATGGAG
CTCGAACACC TGCTCGAAGC CGCGCGCGAT GCCGGCGCGC GTTCGGCGGG CTACGTGCTG
TTGCGCCTGC CGCTGGAGAT CGCCGATCTG TTCGAGGAGT GGCTGCAGGC GCATTTCCCC
GAGCGCGCCG AGCATGTGAT GAGCCTGATC CGCCAGAGCC GCGGCGGCAG GAACTACGAC
AGCCGCTTCG GCAGCCGCAT GCGTGGCGAG GGCCAGTTCG CCGATCTGCT GGCGCAGCGC
TTTCGCCTGG CGCGCCGGCG CCTGCAGCTC GACCAGCGCG AGCCGCTGAG CCTGGACTGC
TCGCTGTTCT GCCCGCCGGG CGCCCAGCTG AGCCTGTTGT AG
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| Protein sequence | MPAPVPPRGR GTASNPHNRY APTRSVAQDD GWYQEETPPS RATEVRRELA KTAITRNKSP
DVGFDRSVNP YRGCEHGCIY CFARPSHAYW DLSPGIDFET RLIAKTNLAD RLEEQLQKPG
YVPQPIALGI NTDAYQPIER EQRLTRQALE ILLRYRHPLH IITKSSLILR DLDLLSELAS
HNLVSVAFSL TTLDDELKRI MEPRTAAPAA RLRAMRTLHE AGVPVSVMCA PMIPMINDME
LEHLLEAARD AGARSAGYVL LRLPLEIADL FEEWLQAHFP ERAEHVMSLI RQSRGGRNYD
SRFGSRMRGE GQFADLLAQR FRLARRRLQL DQREPLSLDC SLFCPPGAQL SLL
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