| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4464 |
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| Symbol | |
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| ID | 5107159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4892636 |
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| End bp | 4893427 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640505735 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001189943 |
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| Protein GI | 146309478 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCCAA ACAGACATCC GGATACCGTC CATCGCAGCC TACCCGAGCT GCCCAGCCTG
CCCCGACCGC TCTACGGCCG GGTCGAGTCG CTGACCAACC GTGCGCTGAC GTTTCGCCAC
ACCCACCCCT GGGTGCAGCT GTCCTATGCC ATCGCCGGGG TGCTCGAGGT GCAGACCGCC
GGCGCCCGCT TCGTCGCCCC GCCGCAGCGC GCGGTGTGGG TACCGGCTGG CGTCGAGCAC
CGCGTGTTCA GCTCGCCGCG CACCGAGATG CGCAGCCTGT ACATCGATGG CAGTGCGGTG
CCCTGGGGGC CGGACGAATG CCGGGTGCTG GCGGTCAGCC CGCTGCTGCG CGAGCTGATT
CGCCGCTTCA GCGATCTGCC GATCGAATAC GACGAACAGG GTGCGCCGGG CCGGCTGGCC
GCGGTGTTGC TGGATGAGCT GCAGGCCGCG CCGGCAGTGG CGCTGATGCT GCCGCTGCCG
CAGGACGCGC GGCTGCGCGC GGTGTGCCAG GGCCTGGAGG ATGCGCGCCT GCGCCAGCTC
GGCCTGGGCG AATGGGGCGA GCGCCTGGGT GTTTCGGAAA AGACCCTGAG CCGGCTATTC
CTGCGCGAAA CCGGCCTGAG TTTCCGCGCC TGGCGCCAGC GCCAGCGTCT GCTCGATGCG
CTGACCCCGC TGGAGCAGGG CGAGCGCGTC ACCGACGTGG CGCTGGCCTG CGGTTATGAC
TCGCTATCGG CCTTTATCGC CGCCTTTCGC CGCCAGTTCG GCGCAACACC TGGGGAGTTT
TTTCGCGAGT AG
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| Protein sequence | MSPNRHPDTV HRSLPELPSL PRPLYGRVES LTNRALTFRH THPWVQLSYA IAGVLEVQTA
GARFVAPPQR AVWVPAGVEH RVFSSPRTEM RSLYIDGSAV PWGPDECRVL AVSPLLRELI
RRFSDLPIEY DEQGAPGRLA AVLLDELQAA PAVALMLPLP QDARLRAVCQ GLEDARLRQL
GLGEWGERLG VSEKTLSRLF LRETGLSFRA WRQRQRLLDA LTPLEQGERV TDVALACGYD
SLSAFIAAFR RQFGATPGEF FRE
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