| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4452 |
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| Symbol | |
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| ID | 5107147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4882641 |
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| End bp | 4883642 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640505723 |
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| Product | luciferase family protein |
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| Protein accession | YP_001189931 |
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| Protein GI | 146309466 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAC TGGCCTCCAT CAAGCTCTCC ACCCTCGACC TGGCGCCGAT TCGCGACGAC
GGCGACGCCG CGCAGGCCCT GCACAATTCG CTGGCGCTGG CCCGGCATGT GGAAAGCCTC
GGCTTCGAAC GCTTCTGGGT GGCCGAGCAC CACAACATGG ATGGCATCGC CAGCTCGGCC
ACCGCCGTGC TGATCGGCTA CCTGGCCGCC GGCACCTCGC GCATCCGCCT CGGCGCCGGC
GGGGTAATGC TGCCCAACCA CGCACCGCTG GTGATCGCCG AGCAGTTCGG CACCCTGGCC
ACGCTCTACC CCGGGCGCAT CGACCTCGGC CTGGGCCGCG CGCCCGGCGC CGACCAGTAC
ACCGCCCATG CCCTGCGCCG CAGCCGCGAC GGCAGCGCCG AGGATTTCCC CAATGACGTC
GAGGAGCTGC AGGCCTACTT GGGCCCGCGC CAGGAAGGCC AGCGGGTGAT CGCCATGCCC
GGCGCCGGCA GCAACGTGCC GATCTGGCTG CTCGGCTCCA GTCTGTTCAG CGCTCAGCTG
GCCGGGATGA AAGGGCTGCC CTACGCCTTC GCCTCGCACT TCGCGCCGCG CTACCTGCAC
GAGGCGATCC GCATCTACCG CAACCACTTC AAGCCTTCCG CCGTACTGGA CAAGCCTTAC
GTGATGCTCG GCGTGCCGCT GCTGGCGGCC GACAGCGACG AGCAGGCGCA ATACCTGGCC
ACCTCGTCGT TCCAGCGCAT CCTCGCGCTG GTGCGCGGCC AGAGCCTGGT GCAACGGGCG
CCGGTGGCGA GCATGGAGGG TCTGTGGCTG CCGCACGAGC GCCAGGCCGT CAGCGAGTTT
CTCGGCCTGG CCGCCATCGG CGGACCGCAG ACCGTGCGCG CGCGTCTGGA ACAGCTGCTG
GAGCAGACCG AGGCGGACGA GCTGATCTTC ACCTGCGACA TGTACGACTT CGCCGACCGC
CTGCACGCCT TCGACATCCT TGCCGAGCTG CAGCGCGGCT GA
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| Protein sequence | MSRLASIKLS TLDLAPIRDD GDAAQALHNS LALARHVESL GFERFWVAEH HNMDGIASSA
TAVLIGYLAA GTSRIRLGAG GVMLPNHAPL VIAEQFGTLA TLYPGRIDLG LGRAPGADQY
TAHALRRSRD GSAEDFPNDV EELQAYLGPR QEGQRVIAMP GAGSNVPIWL LGSSLFSAQL
AGMKGLPYAF ASHFAPRYLH EAIRIYRNHF KPSAVLDKPY VMLGVPLLAA DSDEQAQYLA
TSSFQRILAL VRGQSLVQRA PVASMEGLWL PHERQAVSEF LGLAAIGGPQ TVRARLEQLL
EQTEADELIF TCDMYDFADR LHAFDILAEL QRG
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