| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4426 |
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| Symbol | |
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| ID | 5107121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4846401 |
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| End bp | 4848497 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505692 |
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| Product | flagellar biosynthesis protein FlhA |
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| Protein accession | YP_001189905 |
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| Protein GI | 146309440 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.47767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTAC TGCAGCAACT CGCGCCCACC TTCCGCAGCG GCCGCATCGG CATTCCGGTG
CTGATCCTGT CGATCCTGGC CATGGTCATC CTGCCCCTGC CACCGGTGCT GCTCGATGCC
CTGTTCACCT TCAACATCGC CATGGCCATC CTGGTGCTGC TGGTCAGCGT GTCGTCGAAA
AGCCCGCTGG ACTTCTCCCT GTTCCCCACG GTGATTCTGA TCACCACCCT GCTGCGTCTG
TGCCTGAACG TCGCCTCCAC CCGCGTGGTG CTGCTCGAGG GCCATACCGG CACCGGCGCG
GCGGGCAAGG TGATCGAGTC GTTCGGCGAG GTGGTGATCG GCGGCAACTT CATCGTCGGC
CTGGTGGTGT TCGTGATCCT GATGATCATC AACTTCATCG TCATCACCAA GGGCGGCGAG
CGTATCTCCG AGGTCACCGC GCGTTTCACC CTGGACGCCC TGCCGGGCAA GCAGATGGCC
ATCGACGCCG ACCTCAACGC CGGCCTGATC GAGCAGAACG AAGCCAAGCG TCGCCGCGCC
GAAGTGGCCA AGGAAGCCGA CTTCTACGGG GCTATGGACG GCGCCTCGAA GTTCGTCCGC
GGCGATGCCA TCGCCGGCAT CCTGATCCTG CTGATCAACC TGTTCGGCGG CTTCGCCATC
GGCCTGTTCG TCTACGACCT GGGCGCCGGC CAGGCCTTCC AGCAGTACGC CCTGCTCACC
ATCGGCGACG GCCTGGTGGC GCAGATCCCG GCGCTGCTGC TGTCCACCGC GGCTGCGATC
ATCGTCACGC GGATCAACGA GTCCTCGGAC ATCACCGATC AGGTGCACCG CCAGTTGCTG
GCCCAGCCGG CGCTGCTCTA CACCGTGGCC GGCATTCTCT TCACCCTGGC CCTGGTGCCG
GGCATGCCGC ACCTGGCCTT CATCAGCTTC GCCGCATTGG TGGCCTTCAT CGCCTGGATG
GTGTCGCGCA ACGGCCCGCC GAAAGAAGCG GCGAGCCTGG AGCAGGTCGA AGCCCTGGGC
AAGGCGATGG AACAGGAGCG CGCGCAGAAC CTGGTGTGGG AGGACATCCC GCTGGTGGAG
CGCCTGTCGG TATCGCTGGG CTACAAGCTG GTCGGCCTGG TCAACGAGGC CGCCGGCGCG
CCACTGACCC AGCGCGTGCG CGGCGTCCGC CAGACCCTGT CGGAAAGCCT GGGCTTCCTG
TTGCCCGAGG TGCAGATCCG CGACAGCCTG CGCCTTAAAG CCTCGCAGTA CAGCATCCAG
ATCAACGGCG AGAAGATCGA CGGCGCCGAA CTGCATGCCG ACCGCATGAT GGCCATTCCC
TCGCCGGAGC TCTATGGCGA GATCGACGGC ATTCTCGGGG TCGACCCGGC CTATCGCATG
CAGGTGGTAT GGATTCAGCC GGAGGACAAG GCGCGTGCGC TGAACCTCGG CTACCAGGTG
ATCGACTGTG CCAGCGTCAT CGCCACCCAC CTGAACAAGG TGATCCGCGA ACATCTGCCG
GACGTGTTCA AGCACGACGA TGTCGACCAT CTGATGCAGC GCCTGCAGCT GCAGGCGCCG
AAGCTGGCCG AGAGTCTGAA GAACCAGCTC AGCTACACCC AGCAGCACCG CGTCTACCGC
CAGTTGCTGC AGGAACAGGT GCCGCTCAAG GACATCGTCA CCATCGCCAC CACCCTGCTG
GAAGCCAGCG AGTCGACCAA GGATCCGGTG CTGCTGGCGT CCGACGTGCG CTACGCGCTG
CGCCGCAGCA TCGTCGGCAT GATCGCTGGC GAGCGCCAGG AGCTGTCGGT GTTCATTCTC
GAGAATGCGC TGGAAAACAC CCTGCTCAAT GCCCTGGCTA TCGCCCAACA GGCCGGTCCG
GTGAGCCTGG ACAACATCCC GGTGGAGCCG AGCCTGCTCA ACCAGTTGCA GAACACCATG
CCGGTGGTGA AGGAAAAACT GCGCAAGGAC GGCCACCCAC CGATCCTTAC CGTGATGCCG
CAGCTACGCC CGCTGCTAGC CCGCTACGCC CGGGTCTTCA GCCCAGGTCT GCATGTGCTG
TCGCAGAACG AAATTCCGGA CAGGATGGGG GTCAATATCC TCGGCACCCT GGGCTGA
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| Protein sequence | MNLLQQLAPT FRSGRIGIPV LILSILAMVI LPLPPVLLDA LFTFNIAMAI LVLLVSVSSK
SPLDFSLFPT VILITTLLRL CLNVASTRVV LLEGHTGTGA AGKVIESFGE VVIGGNFIVG
LVVFVILMII NFIVITKGGE RISEVTARFT LDALPGKQMA IDADLNAGLI EQNEAKRRRA
EVAKEADFYG AMDGASKFVR GDAIAGILIL LINLFGGFAI GLFVYDLGAG QAFQQYALLT
IGDGLVAQIP ALLLSTAAAI IVTRINESSD ITDQVHRQLL AQPALLYTVA GILFTLALVP
GMPHLAFISF AALVAFIAWM VSRNGPPKEA ASLEQVEALG KAMEQERAQN LVWEDIPLVE
RLSVSLGYKL VGLVNEAAGA PLTQRVRGVR QTLSESLGFL LPEVQIRDSL RLKASQYSIQ
INGEKIDGAE LHADRMMAIP SPELYGEIDG ILGVDPAYRM QVVWIQPEDK ARALNLGYQV
IDCASVIATH LNKVIREHLP DVFKHDDVDH LMQRLQLQAP KLAESLKNQL SYTQQHRVYR
QLLQEQVPLK DIVTIATTLL EASESTKDPV LLASDVRYAL RRSIVGMIAG ERQELSVFIL
ENALENTLLN ALAIAQQAGP VSLDNIPVEP SLLNQLQNTM PVVKEKLRKD GHPPILTVMP
QLRPLLARYA RVFSPGLHVL SQNEIPDRMG VNILGTLG
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