Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4421 |
Symbol | |
ID | 5107116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4843065 |
End bp | 4843436 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640505687 |
Product | flagellar motor switch protein FliN |
Protein accession | YP_001189900 |
Protein GI | 146309435 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.465417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCC CCATTTCCGA TAATGATTTC GACAGCCTGA TCAACGATGC CGGCCTCAAC CTCGACGAGC CCGTCAGCGA GCCCGTCGCG GAGCAGGCGC CCGCCAGCCT GCCGCAGCAG GACCTGAGCT TCTTCGGCAA GATTCCGGTC AATGTCACTC TGGAAGTGGC CTCCACCGAG ATCACCCTCA AGGAGCTGAT GGATGTCGAT GCAGGCAGCG TGATCGCCCT CGACAAGCTG GCCGGCGAGC CGCTGGACGT GAAGGTCAAC GGTGCGCTGT TCGCCAAGGC CGAAGTGGTG GTGATGAACG GCAACTACGG CCTGCGCATC GTCGAGCTGT CCGGTAGCGG CCTCAGCGGG CTGGGCGTGT GA
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Protein sequence | MSSPISDNDF DSLINDAGLN LDEPVSEPVA EQAPASLPQQ DLSFFGKIPV NVTLEVASTE ITLKELMDVD AGSVIALDKL AGEPLDVKVN GALFAKAEVV VMNGNYGLRI VELSGSGLSG LGV
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