| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4418 |
|---|
| Symbol | |
|---|
| ID | 5107113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 4839997 |
|---|
| End bp | 4840332 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640505684 |
|---|
| Product | flagellar hook-basal body complex subunit FliE |
|---|
| Protein accession | YP_001189897 |
|---|
| Protein GI | 146309432 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1677] Flagellar hook-basal body protein |
|---|
| TIGRFAM ID | [TIGR00205] flagellar hook-basal body complex protein FliE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.376569 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCGA TTAGTCAGGT GCAGCAGGAC CTGCTCGGCC GTATGGAGCA GTTGAAGAAC
CTCAGCGAAG CGGCGCCGAT CAAGCCGGCG CAGGCTTTCG CCGGGCAGCC CGGCGAAGCC
GGTTTCGCCG CCGCCTTCGA CGACGCGGTG CGTGCGGTGG ATGCCCAGCA GCATCGTTCC
GGTGCGCTGA TGGCGGCCGT CGACAGCGGC CAGAGCGACG ATCTGGTCGG GGCGATGATC
GAGAGCCAGA AGGCCAGCGT GTCCTTCAGC GCCCTGCTGC AGGTGCGCAA CAAGCTGGCC
TCGGCCTTCG ACGACATCAT GAAGATGCCG CTGTAA
|
|---|
| Protein sequence | MNSISQVQQD LLGRMEQLKN LSEAAPIKPA QAFAGQPGEA GFAAAFDDAV RAVDAQQHRS
GALMAAVDSG QSDDLVGAMI ESQKASVSFS ALLQVRNKLA SAFDDIMKMP L
|
|---|
| |