| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4398 |
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| Symbol | |
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| ID | 5107251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4821724 |
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| End bp | 4823130 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505664 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_001189877 |
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| Protein GI | 146309412 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.30911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAG CCGCCCTCGC CCCCAACGCC TCTGCGCAGC CGCCTGCCGT GATCGCGCAG
CTGCTGGAAA AACTCGCCGT CCCCTTCCAG GCGCGCGCCG AGGTGCCCGG CCTGCTGGCG
GCGGCTCGGG TGCAGGCCGT GCTGGTGGAT GACGCGGTCG GCGCACTGCT GGTGCTCTAT
CCGCGCAGCC AGTTGCTCGA CCTGGCGCGC CTGGCCGAAC TGACCGGGCG CCAGCTCACC
GCGGTCAAAC CGGAGCGCCT GGAGCGCATG CTCGGCAAGC ACAACCTGAC CGCGCTGCCT
GGCCTGCCGC CGCTGACCAG TTCGCCCTGC CTGTACGAGG AGCGCCTGCT GCAGGTGCCC
AGCCTGCTGA TCGAGTCCGG TCAGCCCGGC GTGCTGCTGG AGATTCCCAC CGAGGCCTAC
AAGAGCCTGC TGAGCAAGGC CAGCGCGGCG CGCTTCGGCG AGCCGGTGCT GGCGATCCGG
CCGAACCTCG ACCGCCCCGA TGACGACCGC GCCGAGATCA CCCAGGCGGT CCAGGCCTTC
ACCGCACGGC GCATCCAGCA GCGACTGGAA GAAACCATCG AGATTCCACC GCTGCCGGAA
ACCGCGCAGA AGATCATCAA GCTGCGGGTC GACCCCAACG CCACGGTCGA CGACATCACC
GGCGTGGTGG AAACCGACCC GGCGCTGGCG GCTCAGGTGA TCAGCTGGGC GGCATCGCCC
TACTACGCCG CGCCCGGCAA GATCCGCTCG GTGGAAGATG CCATCGTCCG CGTGCTGGGC
TTCGACCTGG TGATCAACCT GGCCCTTGGC CTGGCGCTGG GCAAGACCCT CAGCCTGCCC
AAGGACCAGC CGCAGCACGC CACGCCCTAC TGGCAACAGG CGATCTACAC CGCCGCGGTG
ATCGAAGGCC TGACCCGCGC CATGCCCCGC GCCCAGCGCC CGGAAGCCGG CCTGACCTAC
CTCGCCGGTC TGCTGCACAA CTTCGGCTAT CTGGTGCTGG CGCACGTGTT CCCGCCGCAC
TTCTCGCTGA TCTGCCGCCA CCTGGAGGTC AACCCGCACC TGCCTGCCAG CCATATCGAG
CAGCACCTGC TCGGCATCAC CCGCGAACAG ATCGGCGCCT GGCTGATGCG CCACTGGGAC
ATGCCGGAGG AACTGGCCAC CGGCCTGCGC TTCCAGCACG ACCCGAGCTA CGCCGGCGAC
AACGCCGCCT TCCCCAATCT GGTGTGCCTG GCCGTGAGCC TGCTGCGCAA TCGTGGTATC
GGCGCCGGGC CGCAGGGGGA GATTCCCGAG GAACTGTTCG AGGCCCTGGG CCTGAGCCGG
GAAAAGGCCG AAGACGCCGT GAGCAAGGTG CTCAGCGCCG AAGTGGCGCT GCGTGAGCTG
GCGGCGCAGT TCCAGCACCC GCACTGA
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| Protein sequence | MTEAALAPNA SAQPPAVIAQ LLEKLAVPFQ ARAEVPGLLA AARVQAVLVD DAVGALLVLY
PRSQLLDLAR LAELTGRQLT AVKPERLERM LGKHNLTALP GLPPLTSSPC LYEERLLQVP
SLLIESGQPG VLLEIPTEAY KSLLSKASAA RFGEPVLAIR PNLDRPDDDR AEITQAVQAF
TARRIQQRLE ETIEIPPLPE TAQKIIKLRV DPNATVDDIT GVVETDPALA AQVISWAASP
YYAAPGKIRS VEDAIVRVLG FDLVINLALG LALGKTLSLP KDQPQHATPY WQQAIYTAAV
IEGLTRAMPR AQRPEAGLTY LAGLLHNFGY LVLAHVFPPH FSLICRHLEV NPHLPASHIE
QHLLGITREQ IGAWLMRHWD MPEELATGLR FQHDPSYAGD NAAFPNLVCL AVSLLRNRGI
GAGPQGEIPE ELFEALGLSR EKAEDAVSKV LSAEVALREL AAQFQHPH
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