| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4389 |
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| Symbol | rpoZ |
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| ID | 5107242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4812296 |
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| End bp | 4812559 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640505655 |
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| Product | DNA-directed RNA polymerase subunit omega |
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| Protein accession | YP_001189868 |
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| Protein GI | 146309403 |
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| COG category | [K] Transcription |
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| COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
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| TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.100298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGCG TTACCGTCGA AGATTGCCTG GACAACGTTG ATAACCGCTT CGAACTGGTC
ATGCTCGCGA CCAAGCGTTC GCGCCAGCTG GCCACCGGCG GCAAAGAGCC GAAAGTGGCC
TGGGAAAACG ACAAGCCCAC CGTGGTGGCC CTGCGCGAAA TCGCTGCCGG CCTGGTGGAC
TACGAAGTGG TCGCCCAGGA AGACATCGTC GAAGAAGAAC CGCTGTTCGC CGCCTTCGAG
GAAGAGGCCA ACGAGCCTCT GTAA
|
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| Protein sequence | MARVTVEDCL DNVDNRFELV MLATKRSRQL ATGGKEPKVA WENDKPTVVA LREIAAGLVD
YEVVAQEDIV EEEPLFAAFE EEANEPL
|
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