Gene Pmen_4385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4385 
Symbol 
ID5107238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4809372 
End bp4809743 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content61% 
IMG OID640505651 
Producthypothetical protein 
Protein accessionYP_001189864 
Protein GI146309399 
COG category[S] Function unknown 
COG ID[COG3296] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0977203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG ATATGCAAAG CCCGCTTCCG ACACCCAGTC AGGAAGCCCG TCAGTGGGCC 
ATGTTCTGCC ACTTCGCCGC GTTTCTCGGC CTGGTGTTCC CCTTCGGCAA TCTGCTCGGG
CCGCTGATCG TCTGGCAGAT CAAGAAGGAC CTCGACCCCT TCGTCGATGC CCAGGGCAAG
GAGGCGCTGA ACTTTCAGAT CAGCGTGGCG CTGGCAGCGA TCGTCTGCTT CATCCTGATG
GTGGTGATCA TCGGCTTCCC GCTGCTGGTG CTGCTGGGTA TCGCCGCGCT GGTGCTGACC
ATCATCGCCG GGATCAAGGC CAACGAAGGC CAGGCTTATC GCTATCCCTT CGCCTGGCGC
CTGGTGAAGT AG
 
Protein sequence
MNDDMQSPLP TPSQEARQWA MFCHFAAFLG LVFPFGNLLG PLIVWQIKKD LDPFVDAQGK 
EALNFQISVA LAAIVCFILM VVIIGFPLLV LLGIAALVLT IIAGIKANEG QAYRYPFAWR
LVK