Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4384 |
Symbol | |
ID | 5107237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4808463 |
End bp | 4809242 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640505650 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_001189863 |
Protein GI | 146309398 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.465503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.053083 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATCA TCAGTGTGAA CGTGAATGGT ATTCAGGCTG CGGCCGAGCG AGGATTGCTC AGCTGGCTGC AAGCCCAGAA TGCCGACGTG ATCTGCCTGC AAGACACCCG TGCCTCCGCC TTTGAAATGG ACGACCAAGC CTTCCAACTG GATGGTTATT TCCTCTATGC ATGCGACGGT GAAGTGCCCA GCCAAGGTGG CGTGGCGCTG TATTCGCGTT TGCAACCCAA GGCGGTGATC AGCGGCCTCG GCTTCGAGAT GGCCGATCGC TACGGGCGCT ACCTGCAGGC AGATTTCGAC AAGGTAAGTA TCGCCACCCT GCTCCTGCCC ACCGGGCGGG ACGGCGACGA GAGCTTGAAT CAGAAATTCA AGTTCATGGA CGACTTCACC CATTATCTGG ACAAGCAACG GCGCAAGCGC CGCGAGTACA TCTACTGCGG TTCGCTGCAC GTGGCGCACC AGAAGCTGGA CGTGAAGAAC TGGCGCGACT GCCAGCAATC ACCCGGCTTC CTTGCACCCG AACGCGCCTG GATGGATGAA GTGGTCGGCA ACATGGGCTA TGTCGACGCG CTGCGCGAAG TCAGCCGCGA AGGTGACCAG TTCAGCTGGT GGCCGGACAA CGAGCAGGCC GAGATGCTCA ACCTGGGCTA TCGCTTCGAC TACCAACTGC TCACGCCGGG CATGCGCCGC AGCGTGCGCA GCGCACGCCT GCCACGCCAG CCGCGCTTCT CCCAGCACGC GCCGCTGATC GTCGACTACG ACTGGATTCT CAGCGTCTGA
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Protein sequence | MRIISVNVNG IQAAAERGLL SWLQAQNADV ICLQDTRASA FEMDDQAFQL DGYFLYACDG EVPSQGGVAL YSRLQPKAVI SGLGFEMADR YGRYLQADFD KVSIATLLLP TGRDGDESLN QKFKFMDDFT HYLDKQRRKR REYIYCGSLH VAHQKLDVKN WRDCQQSPGF LAPERAWMDE VVGNMGYVDA LREVSREGDQ FSWWPDNEQA EMLNLGYRFD YQLLTPGMRR SVRSARLPRQ PRFSQHAPLI VDYDWILSV
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