| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4380 |
|---|
| Symbol | |
|---|
| ID | 5107233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 4805546 |
|---|
| End bp | 4806451 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640505646 |
|---|
| Product | acetylglutamate kinase |
|---|
| Protein accession | YP_001189859 |
|---|
| Protein GI | 146309394 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0548] Acetylglutamate kinase |
|---|
| TIGRFAM ID | [TIGR00761] acetylglutamate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.114818 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCG AGCGTGACGC CGCCGCCCAG GTTGCCAAGG TACTGTCCGA AGCCCTGCCT
TACATTCGCC GCTTCGTCGG CAAGACCCTG GTGATCAAGT ACGGCGGCAA CGCCATGGAA
AGCGAGGAAC TCAAGCAGGG CTTCGCCCGC GACATCGTGC TGATGAAGGC GGTGGGCATC
AACCCGGTGG TGGTACACGG CGGCGGCCCG CAGATCGGCG ACCTGCTCAA GCGCCTGTCG
ATCGAGAGCC ATTTCATCGA CGGCATGCGC GTCACCGACA CCGCCACCAT GGACGTGGTG
GAAATGGTCC TCGGCGGCCA GGTCAACAAG AGCATCGTCA ACCTGATCAA CCAGCACGGT
GGCAGCGCCA TCGGCCTGAC CGGCAAGGAC GCCGGCCTGA TCCGCGCGAA GAAGCTCAAG
GTCACCCGCC AGACGCCGGA AATGACCCAG CCGGAAATCA TCGACATCGG TCATGTCGGC
GAGGTTACCG GGGTCAACAC CGAGCTGCTC AACATGCTGG TGCAGGGCGA TTTCATCCCG
GTCATCGCGC CCATCGGTGT CGGCCCGGAC GGCGAGTCGT ACAACATCAA CGCCGACCTG
GTGGCCGGCA AGGTGGCCGA AGCGCTGAAG GCCGAGAAGC TGATGCTGCT GACCAACATC
GCCGGCCTGC TGGACAAGCA GGGCGAAGTG CTCACCGGGC TGACCACCGA GCAGGTCGAC
GGCCTGATCG CCGACGGCAC CATCTACGGC GGCATGCTGC CGAAGATCCG CTGCGCCCTG
GAAGCGGTGC AGGGCGGCGT GCACAGCGCG CATATCGTTG ACGGTCGCGT ACCCAACGCG
GTGCTGCTGG AAATCTTCAC CGACAGCGGC GTCGGCACCC TGATCACCAA CCGCAAGCGC
CATTAA
|
|---|
| Protein sequence | MTLERDAAAQ VAKVLSEALP YIRRFVGKTL VIKYGGNAME SEELKQGFAR DIVLMKAVGI
NPVVVHGGGP QIGDLLKRLS IESHFIDGMR VTDTATMDVV EMVLGGQVNK SIVNLINQHG
GSAIGLTGKD AGLIRAKKLK VTRQTPEMTQ PEIIDIGHVG EVTGVNTELL NMLVQGDFIP
VIAPIGVGPD GESYNINADL VAGKVAEALK AEKLMLLTNI AGLLDKQGEV LTGLTTEQVD
GLIADGTIYG GMLPKIRCAL EAVQGGVHSA HIVDGRVPNA VLLEIFTDSG VGTLITNRKR
H
|
|---|
| |