| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4376 |
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| Symbol | radC |
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| ID | 5107229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4800411 |
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| End bp | 4801085 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505642 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_001189855 |
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| Protein GI | 146309390 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0839768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATTC GTGACTGGCC CGCGGCGGAG CGTCCGCGGG AAAAACTCCT GGCGCAGGGC
GCGGCCGCGC TGACCGACGC CGAACTGCTG GCGATCTTCC TGCGTACCGG TGTGGCCGGC
TGCAGCGCGG TGGATCTGGC GCGCCGGCTG CTCGCCGAGT TCGGCAGCCT GCGTGCGCTG
CTCGAGGCGG AGTTGCCCGA CTTCAGCCAG CACCTGGGCC TGGGCCCGGC CAAGTACGCG
CAGCTGCAGG CCGTGCTGGA GATGGCCAGA CGGCACCTGG CCGAGCGGCT GCGTCGCGAT
TCGGCGCTGG AAAGCCCGCA GGCCGTGCGC GATTACCTCA AGGCGCAGCT GCGCCATGAG
CCGCACGAGG TGTTCGGCTG TCTGTTTCTC GATGCCAAGC ACCGCGTGCT GGCCTTCGAA
GTACTGTTTC GCGGCAGCAT CGACAGCGCC AGCGTCTACC CGCGGCAGGT GGTCAAGCGA
GCGCTGGCCA ACAATGCCGC GGCCGTCATC CTCACCCACA ATCACCCATC CGGTGTCTGC
GAACCCAGTC AGGCCGACCG CGTGCTGACC CAGCGGCTCA AGGATGCGCT GGCGCTGGTG
GAAGTGCGCG TGCTCGATCA CTTCATCGTC GGCGACGGCG AGCCGCTGTC GATGGCCGAG
CTGGGCTGGA TGTAG
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| Protein sequence | MSIRDWPAAE RPREKLLAQG AAALTDAELL AIFLRTGVAG CSAVDLARRL LAEFGSLRAL
LEAELPDFSQ HLGLGPAKYA QLQAVLEMAR RHLAERLRRD SALESPQAVR DYLKAQLRHE
PHEVFGCLFL DAKHRVLAFE VLFRGSIDSA SVYPRQVVKR ALANNAAAVI LTHNHPSGVC
EPSQADRVLT QRLKDALALV EVRVLDHFIV GDGEPLSMAE LGWM
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