| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4368 |
|---|
| Symbol | |
|---|
| ID | 5107221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 4790241 |
|---|
| End bp | 4791317 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640505634 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001189847 |
|---|
| Protein GI | 146309382 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | [TIGR03169] pyridine nucleotide-disulfide oxidoreductase family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGCT ACGACCTGCT GCTGGCTGGA GCCGGCCATG CTCACCTGGG TGTGCTGCGC
CGCTGGGCGC TGGTGGAGCG GCCGCCGGGA CGCATCGGCG TGCTCGCGCT CGGCCCCGAC
GCCTGGTACG CCGGCATGCT GCCGGGCTTG ATCAGCGGCC GTTTCAGCGA GGCGGACTGC
CGCGTGGAAC TGCAGCCGCT GTGCCGCGCG GCCAAGGTGG AGCTGATCGA GGGCGAGATC
GCCACGCTGG ATGCCGATGC CCGCGTGCTG CGCTTGGTCG ATGGGCGCAG CCTTGCGGCC
GAGTGGCTGT CGCTCAACGT CGGTGCCGGC ATGGCCATAC CGCCGCAGCA GGGCGACGCC
ATGCAGGTGC TGGCGGCCAG GCCCATCGGT GCGTTGCTCG AGGGCTGGCG GCAATGGCAG
GCCGAGCCAC GGCGCATGGC CATCCTCGGC GGCGGCGCGG GAGGTGTCGA GCTGGCGCTG
GCACTGGCCG ACAAGGTGCC GGGGGTGGCG CTGTTCTGCG GCGGGCCGCT GCTCGCCGGC
CTGGCGCCCG GGTTGCGCCT GCGCGCGCTG GGCCTGCTGC GTCAGCGTGG CGTGCAGGTG
CGCGAGCACT GCCCGATCGG ACGGATCGAG GACGACTGGC TGCTCAGCGG CGACGAGCCG
GTGTGGCGCG GTCGGCGTCT GCTGCTGGCC AGCGGCGCAC GGCCCTGGCC CTGGCTGGCC
GCCAGCGGCC TGGCGCGCGA TGCGGCGGGT TTCGTCGCCA TCCGCCCGAC CCTGCAGAGC
GAGTCGCATG GGCAGATCTT CGCCGTGGGC GACAGCGCCA GCCTCGACGG CATGCGCCGC
AGCGGGCGCT TCGCGGTGCG GCAGGCGCCA GTGCTCACGG CCAACCTGCA GGCCGCCCTG
GTCGGTCGAC CGCTGCGGCC TTATCGCGCG CAATGGCAGA GCCTGGCCTT GCTGGCCACC
GGCGATGGCG GAGCGCTGCT CGGCTGGCAC GACTGGAGCG CCGGCGGGCA GCTGTATGGG
CGCTGCAAGG ACTGGCTGGA CAGGCGTTTC ATCCAGCGCC ACCGGCTGGC GGGATGA
|
|---|
| Protein sequence | MSRYDLLLAG AGHAHLGVLR RWALVERPPG RIGVLALGPD AWYAGMLPGL ISGRFSEADC
RVELQPLCRA AKVELIEGEI ATLDADARVL RLVDGRSLAA EWLSLNVGAG MAIPPQQGDA
MQVLAARPIG ALLEGWRQWQ AEPRRMAILG GGAGGVELAL ALADKVPGVA LFCGGPLLAG
LAPGLRLRAL GLLRQRGVQV REHCPIGRIE DDWLLSGDEP VWRGRRLLLA SGARPWPWLA
ASGLARDAAG FVAIRPTLQS ESHGQIFAVG DSASLDGMRR SGRFAVRQAP VLTANLQAAL
VGRPLRPYRA QWQSLALLAT GDGGALLGWH DWSAGGQLYG RCKDWLDRRF IQRHRLAG
|
|---|
| |