Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4355 |
Symbol | |
ID | 5107208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4771464 |
End bp | 4772234 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640505621 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001189834 |
Protein GI | 146309369 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCTCA ATGGAAAGAC CGCTCTGATC ACCGGCTCGA CCAGCGGGAT CGGCCTCGGC ATCGCCGAGG TGCTGGCGCG CAACGGCGCC AGCGTCATTC TCAACGGTTT CGGCGACTGG CAGGCCGCGG CCGAACAGCT GGCGCGCCAC GAAGGACGCG TCGGCTACCA CGCCGCCGAC CTCGCCGACC CGGCGCAGAT CGAGGCGCTG TTCGACTACG CCCGGCGCGA GTTCGGCCGC GTCGATATCC TGGTCAACAA TGCCGGCATC CAGCATGTCG CGCCGCTGCA GGACTTTCCC GCCGAACGCT GGGACGCCAT TCTCGCGCTC AACCTCAGCG CGGTATTCCA TTGCACGCGC CTGGCCCTGC CGGACATGCG CGCGCAGGAC TGGGGGCGCA TCATCAACAT CGCCTCGGTG CACGGCAGCG TCGGCTCGCT CGGCAAGGCG GCCTATGTCG CGGCCAAGCA CGGCGTGCTC GGCCTGACCA AGGTGGTGGC GCTGGAAACC GCCCTGAGCG GGGTCACCTG CAATGCCATC TGTCCCGGCT GGGTGCTCAC GCCCCTGGTG CAGCGGCAGA TCGACGCGCG CATCGCCGCA GGCGAATCAC CCGAGCAGGC GCGCACGGCG CTGCTGGCCG AGAAGCAGCC ATCGCAGGCC TTCGTCACCC CGCAGCAGCT CGGCGAGCTG GCGCTGTTTC TGTGCAGTTC GGCGGCGCAG CAGGTGCGTG GCGCAGCATG GAACATCGAC GGCGGCTGGC TGGCGCAATG A
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Protein sequence | MMLNGKTALI TGSTSGIGLG IAEVLARNGA SVILNGFGDW QAAAEQLARH EGRVGYHAAD LADPAQIEAL FDYARREFGR VDILVNNAGI QHVAPLQDFP AERWDAILAL NLSAVFHCTR LALPDMRAQD WGRIINIASV HGSVGSLGKA AYVAAKHGVL GLTKVVALET ALSGVTCNAI CPGWVLTPLV QRQIDARIAA GESPEQARTA LLAEKQPSQA FVTPQQLGEL ALFLCSSAAQ QVRGAAWNID GGWLAQ
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