Gene Pmen_4350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4350 
Symbol 
ID5107203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4766150 
End bp4766944 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content70% 
IMG OID640505616 
ProductXRE family transcriptional regulator 
Protein accessionYP_001189829 
Protein GI146309364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATT CCCAGACCGC CGGCGCCCTG TTGCGCCAAT GGCGCCAGCG GCGCCGCCTG 
AGCCAGCTCG ACCTCGCCTG CGAGGCCGAA ATCTCCACAC GCCACCTGAG CTTCGTCGAA
ACCGGCCGCG CCCAGCCCAG CCGCGACATG CTGCTGCACC TGGCGGAACA GCTGGACATG
CCGCTGCGCG AGCGCAACCG CCTGCTCGGC GCCGCCGGCT ACGCCCCGCT GTACAGCCAG
CACGACCTGG CCGACCCGGC GCTGGCACCG GCGCGCCAGG CCATCGAACA GTTGCTCAAG
GCCCATGAGC CCTATCCGGC GCTGGCCATC GACCGGCAGT GGAACCTACT GGCGGCCAAT
GCGGCCGTGG GCACCTTCAT CGCCGACATG CCGGCGTTCC TGCTGGGCCC GCCGCTCAAC
GTGATGCGCC TGTCGCTGCA CCCCGAGGGC CTGGCGCCGC GCATCGCCAA CCTGGCGCAG
TGGCGCGCGC ACCTGCTGAT GCGCCTGCAG CGCGATGCCG AAATCAGCGG CGACGAAGCG
CTTTTCACCC TGCTCGACGA GCTGCGCAGC TATCCCGCGC CCCTCGAGGT CGCCGAACCG
CACGCGGATG CGGTGCTGGT GCCCCTGCAA CTGCACAGCG AGCACGGCGT GCTGAGCCTG
ATCAGCACCA TCACCGTATT CGGCACGCCG AACGACGTGA CCCTGGCCGA ACTGGCGCTG
GAAACCTTCT TCCCCGCCGA TGCCTTCACC GCCGCCTACC TGCGCGAGCT GGCCGGGCGA
CCGGGCGAGG GGTGA
 
Protein sequence
MNNSQTAGAL LRQWRQRRRL SQLDLACEAE ISTRHLSFVE TGRAQPSRDM LLHLAEQLDM 
PLRERNRLLG AAGYAPLYSQ HDLADPALAP ARQAIEQLLK AHEPYPALAI DRQWNLLAAN
AAVGTFIADM PAFLLGPPLN VMRLSLHPEG LAPRIANLAQ WRAHLLMRLQ RDAEISGDEA
LFTLLDELRS YPAPLEVAEP HADAVLVPLQ LHSEHGVLSL ISTITVFGTP NDVTLAELAL
ETFFPADAFT AAYLRELAGR PGEG