Gene Pmen_4345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4345 
Symbol 
ID5107198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4761697 
End bp4762695 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content65% 
IMG OID640505611 
Productsulfate ABC transporter, periplasmic sulfate-binding protein 
Protein accessionYP_001189824 
Protein GI146309359 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1613] ABC-type sulfate transport system, periplasmic component 
TIGRFAM ID[TIGR00971] sulfate/thiosulfate-binding protein 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTC GTCGTTTCGC CCTGGCCGCG CTGGCCAGTG CCCTGATCGC CGGCCCGGCG 
GCCGCTGCAC AAACCCTGCT CAACGTGTCG TACGACCCGA CCCGCGAGCT CTATACCGAA
TTCAACGCCG CGTTCAACAA GCACTGGCAG GCCCAGGGCA ACGAGGCGGT GACCATCCAG
CAATCCCACG GCGGCTCGGG CAAGCAGGCC CGCGCGGTGA TCGACGGCCT GCGCGCCGAC
GTGGTGACCC TGGCCCTGGC CGGCGATATC GACGAGCTGT ACAAGCTCGG CAAGCTGATC
CCGGAAAACT GGCAGGAGCG CCTGCCGGAC GCCAGCACCC CCTACACCTC GACCATCGTG
TTCCTGGTGC GCAAGGGCAA CCCCAAGGGC ATCAAGGATT GGGATGACCT GGTCAAGCCG
GGCGTGGAAG TGATCACCCC CAACCCGAAA ACTTCCGGCG GCGCACGCTG GAATTTCCTC
GCCGCCTGGG CCTATGCCCA GCAGAAGTAC GGCAGCGAAG CCGAGGCCAA GGCCTTCACC
GAGAAGCTGT ACAAGAATGT CCCGGTGCTC GACACCGGCG CCCGCGGCTC CACCATCACC
TTCGTCAACA ACGGCATCGG CGACGTGCTG CTGGCCTGGG AAAACGAAGC CTTCCTGGCC
CTCAAGGAAG AAGGTGGCGA CAACTTCGAG ATCGTCGCGC CGTCGCTGTC GATCCTCGCC
GAGCCGCCGG TCAGCGTGGT CGACCAGAAC GTCGACAAGA AAGGCACCCG CAAGGTCGCC
GAGGCCTACC TGAACTACCT GTACAGCGAG GAAGGCCAGC GCATCGCCGC CAAGCACTTC
TACCGTCCAC GCAACCAGGC GGTGGCGGCC GAGTTCGCCA AGCAGTTCCC GCAGCTCAAG
CTGGTGACCA TCGACGCTGA CTTCGGCGGC TGGAAAACCG CTCAGCCGAA GTTCTTCAAC
GACGGCGGCA TCTTCGACCA GATCTACCAG GCCCATTGA
 
Protein sequence
MSLRRFALAA LASALIAGPA AAAQTLLNVS YDPTRELYTE FNAAFNKHWQ AQGNEAVTIQ 
QSHGGSGKQA RAVIDGLRAD VVTLALAGDI DELYKLGKLI PENWQERLPD ASTPYTSTIV
FLVRKGNPKG IKDWDDLVKP GVEVITPNPK TSGGARWNFL AAWAYAQQKY GSEAEAKAFT
EKLYKNVPVL DTGARGSTIT FVNNGIGDVL LAWENEAFLA LKEEGGDNFE IVAPSLSILA
EPPVSVVDQN VDKKGTRKVA EAYLNYLYSE EGQRIAAKHF YRPRNQAVAA EFAKQFPQLK
LVTIDADFGG WKTAQPKFFN DGGIFDQIYQ AH