Gene Pmen_4343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4343 
Symbol 
ID5107196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4760598 
End bp4761179 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content70% 
IMG OID640505609 
Producthypothetical protein 
Protein accessionYP_001189822 
Protein GI146309357 
COG category[R] General function prediction only 
COG ID[COG3545] Predicted esterase of the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGCG AAGCAATCCG TTATCTGATT CTGCCGGGCT GGCAGGGCTC GCCCGAGGAG 
CACTGGCAAA GCCATTGGCA GCGCAGCCTG CCGAACAGCA CGCGGGTGGA GCAGGCCGAC
TGGCTCCATC CACGGCGCGC CGACTGGGTG AGCGAGCTGA ACCGCGCCGT GGCCGCCGAC
CCGCGCCCTG CCATTCTCAT TGCCCACAGC CTGGGCTGCG TCACGGTCGC CCACTGGGCG
GCGCAGGCAC CGATCGATCT GCTGCGTCGC GTACGCGGCG CCCTGCTGGT GGCGCCGGCC
GATGTCGAGC GCCCGGGCTG CCCCGCACCA CTGCAGAATT TCGCACCGAT GCCGCGTGAT
CTGCTGCCCT TCCCCAGCCT GCTGGTGGGC TCCGACAACG ACGCGGCGGC CAGCGCCCTG
CGCGCCCTGG AGCTGGCGCG CGCCTGGGGC AGCGAGGCGG CGATTCTCAC CGGTGCCGGG
CATATCAACG TGAAGTCCGG GCATCGCCAT TGGGAGCAGG GCTTCGGCTA TCTGTATCGC
CTGCAGAGCC GCATCGAACA GCAGACGCGC CTGCGCGCCT GA
 
Protein sequence
MGSEAIRYLI LPGWQGSPEE HWQSHWQRSL PNSTRVEQAD WLHPRRADWV SELNRAVAAD 
PRPAILIAHS LGCVTVAHWA AQAPIDLLRR VRGALLVAPA DVERPGCPAP LQNFAPMPRD
LLPFPSLLVG SDNDAAASAL RALELARAWG SEAAILTGAG HINVKSGHRH WEQGFGYLYR
LQSRIEQQTR LRA