| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4341 |
|---|
| Symbol | |
|---|
| ID | 5107194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 4758070 |
|---|
| End bp | 4759194 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640505607 |
|---|
| Product | molybdate ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_001189820 |
|---|
| Protein GI | 146309355 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4148] ABC-type molybdate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02142] molybdenum ABC transporter, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.884893 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGTT TCGGCAAGGC CAAGGCGCCT GTCGTCAGTG ACGACGGGCG CATCCGCGCG
CGCTTCGTGC TACAGCACGC CGACTTTCGC CTGGACGTGA ACCTCGACCT GCCGGCCCGT
GGCGTCAGCG CCCTGTTCGG CCACTCCGGC TCGGGCAAGA CCAGTTGCCT GCGCTGCTTC
GCCGGGCTGG AGCGCCCGCA GCAGGGCTAC CTGCAGGTGG CCGGCGAACT CTGGCAGGAC
AGCGAGCGAG GTTTCTTTCT GCCGGCACAC CAGCGCGCCA TCGGCTACGT GTTCCAGGAC
GCCAACCTGT TCCCGCACCT GAGCGTGCGC GGCAATCTGC AGTACGGGCA GAAACGCATC
CCGGCCGCGC AGCGCAGGGT GGCGCTGGAT CAGGCGCTGG AGCTGCTGGG CATCGGCCAT
CTGCTCGAGC GCATGCCGTC GGCGCTGTCC GGTGGCGAAC GGCAGCGCGT CGGCATCGCC
CGCGCCCTGG TGACCAGCCC GCGCCTACTG CTGATGGACG AACCGCTGGC CTCGCTGGAT
CTGAAGCGCA AGCAGGAAGT GCTGCCCTAC CTGCAGCGCC TGCACGAGGA GCTGGACATC
CCCGTGCTTT ACGTCAGCCA CGCCCCGGAC GAGGTGGCGC GCCTGGCCGA TCACCTGGTG
TTGCTCGACG ACGGCCAGGT GCGCGCCAGC GGCCCGCTCA AGGAAACCCT GCTGCGCGCC
GACCTGCCCT TCGCCAGCGA TGAGGATGCC GAGGCGGTGA TCGACGGCGA GGTCTGCGGT
CATGCTGCCG CCTACGACCT GCTGGAACTT CGACTGCCTG GCAGCGAGGC GCGCCTGCGC
CTGCCTCACG CGGCATTGCC CAACGGCCAT CCGGTGCGGG TGAAGATCAA GGCGCGCGAC
GTCAGCCTCA GCCTGCAACG CGCCGAGGGC AGCAGCCTGC TCAACCTGCT GCCGGCGACG
GTGGAAAGCT GGCAGGCGCT CGATGCGCAG ACGCTGCTGA CCCTGCGCCT GGGCGAGCAG
CGCCTGCTGG CGCGAATCAC CCGCTATTCC TTCGATCAGC TGGGCATTCA TGCTGGCCAG
GCGCTCTGGG CGCAGATCAA GTCGGTGTCG TTGCTGGCGC CGTAG
|
|---|
| Protein sequence | MFGFGKAKAP VVSDDGRIRA RFVLQHADFR LDVNLDLPAR GVSALFGHSG SGKTSCLRCF
AGLERPQQGY LQVAGELWQD SERGFFLPAH QRAIGYVFQD ANLFPHLSVR GNLQYGQKRI
PAAQRRVALD QALELLGIGH LLERMPSALS GGERQRVGIA RALVTSPRLL LMDEPLASLD
LKRKQEVLPY LQRLHEELDI PVLYVSHAPD EVARLADHLV LLDDGQVRAS GPLKETLLRA
DLPFASDEDA EAVIDGEVCG HAAAYDLLEL RLPGSEARLR LPHAALPNGH PVRVKIKARD
VSLSLQRAEG SSLLNLLPAT VESWQALDAQ TLLTLRLGEQ RLLARITRYS FDQLGIHAGQ
ALWAQIKSVS LLAP
|
|---|
| |