Gene Pmen_4338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4338 
Symbol 
ID5107191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4755724 
End bp4756350 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content70% 
IMG OID640505604 
Productmethyltransferase type 11 
Protein accessionYP_001189817 
Protein GI146309352 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGA GCCCCGAGGA ACTTGCCCAG ATCAGCGCCC TGACCCTGGC CCATTACCAG 
GGCTGCGCCG AGGACTTTCG CGAGGGCACG CGCGACCATG ACGTGAGCCA GAACATCGCC
GCCCTGCTGC GCCATATCCA GGGCGAAAGG CCCTGGCGCA TCCTCGATTT CGGCTGCGGG
CCGGGGCGTG ACCTGCGCAC CTTCAGCGGC CTGGGCCACG AGGCCATCGG CCTGGATGGC
TGCGCCGAGT TCGTCGCCAT GGCGCGCGCC GACAGCGGCT GCGAGGTCTG GCAGCAGAGC
TTTCTCGCGC TCGACCTGCC GGCCGGGCAT TTCGACGGCA TCTTCGCCAA CGCCAGCCTG
TTCCATGTGC CGGATCAGGA GCTGCCGCGC GTGCTCGGCC AGCTGCATGG GGCGCTGAAG
AGCGGCGGCG TGCTGTTCAG CTCCAACCCG CGTGGCGACA ACCAGGAAGG CTGGAACGGT
GAGCGCTACG GCAGCTACCA CGACCTCGAG CGCTGGCGCG CCCGCCTCAC CGCCGCCGGC
TTCGTCGAAC TGGAGCATTA CTACCGCCCC GCCGGCCTGC CACGCGAGCA GCAACCCTGG
CTGGCCAGCG TTTGGCGACG CGCCTGA
 
Protein sequence
MPLSPEELAQ ISALTLAHYQ GCAEDFREGT RDHDVSQNIA ALLRHIQGER PWRILDFGCG 
PGRDLRTFSG LGHEAIGLDG CAEFVAMARA DSGCEVWQQS FLALDLPAGH FDGIFANASL
FHVPDQELPR VLGQLHGALK SGGVLFSSNP RGDNQEGWNG ERYGSYHDLE RWRARLTAAG
FVELEHYYRP AGLPREQQPW LASVWRRA