Gene Pmen_4336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4336 
Symbol 
ID5107189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4752837 
End bp4754021 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content71% 
IMG OID640505602 
Productprotein of unknown function DUF395, YeeE/YedE 
Protein accessionYP_001189815 
Protein GI146309350 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAA GTATCGCCAC CCCTCGCGCA ACGCTATCCA TCGCTACGTC CGGCCTGATC 
ACCATCGCCC TGCTCGCCTT CATCTGGCAG CTGGCCGACG GCAGCAACGA AGGCCGCGCC
TTCAGCTACT CGCTGGCCAG CGGCGCGCTG TTCGGCCTGC TGCTGCAGCG TTCGCGCTTC
TGCTTCTTCT GCGTGACCCG CGACTTCGTC GAACGCCGCA TACCGGACGG ACTGCTCGGT
CTGCTCGCCG CCCTTGCGGT GGGCACCCTC GGCTATCACG CGGTGTTCGG CGCCTTCCTG
CCCGACCCCA GCGGCGGGCG CCTGCCCCCG GATGCCCATA TCGGCCCGCT GAGCTGGGTG
CTGGCTCTGG CCGCCACGGT GTTCGGCCTC GGCATGGCGA TTTCCGGCTC GTGCATCAGC
GCGCACCTGT ATCGCCTCGG TGAGGGCAAT TTCGCCTCGC TGGCCGCGCT GGGCGGCGCG
CTGCTCGGCT TCGCCCTGGG TTTTCTCAGC TGGAACCCGC TGTATCTGGC CGCCCTGCAG
GAAGCACCGG TGCTCTGGCT GCCCGGCCGG CTCGGTTACG GCGGCTCGCT GCTGCTGCAA
CTGGCGCTGC TGGGTGCGCT GGCCGCCTGG CTGCTGCGGT ATCGCCAGCC GGGCAGGTCG
GCCGAAGCGC AGGGGCTGTG GTCGCTGCTG TTCGGCGCAC GCTGGTCGAC CTGGGTCGGC
GGCGTGCTGA TCGGTGGGCT GGCGGTGCTG GCCTACTTTC GCGTCGCACC GCTGGGGGTG
ACGGCCGAAC TGGGCAGCCT GGCGCGCACC GGCGCGGACA GCCTGGGCTG GCTGCCACAG
CGCCTGGAGG GACTGGACGG CTTTTCCGGC TGCGCCACGA TGGTCAAGGA GACTCTGCTG
TCGAACAACG GCCTGTTCGT CATCGGCCTG GTGATCGCGG CCTGGGCCAG CGCCCTGGCC
GCCGGCGATT TCCGTCCCAG CAGCGGCGCG CCCCGCGACT GGCTGCGCGG CCTGCTCGGC
GGCGTGCTGC TGGGCTGGGG CAGCCTGCTG GCGTTGGGCT GTACCGTGGG CACGCTGCTG
TCCGGAGTGA TGGCCGGCGC GGCATCGGGC TGGGTGTTCG GGCTGTTCTG CCTGCTCGGC
ATAGTGCTCG GCCTGAAGCT GCGGCCGCTG TTGCGCTTGG GCTGA
 
Protein sequence
MTASIATPRA TLSIATSGLI TIALLAFIWQ LADGSNEGRA FSYSLASGAL FGLLLQRSRF 
CFFCVTRDFV ERRIPDGLLG LLAALAVGTL GYHAVFGAFL PDPSGGRLPP DAHIGPLSWV
LALAATVFGL GMAISGSCIS AHLYRLGEGN FASLAALGGA LLGFALGFLS WNPLYLAALQ
EAPVLWLPGR LGYGGSLLLQ LALLGALAAW LLRYRQPGRS AEAQGLWSLL FGARWSTWVG
GVLIGGLAVL AYFRVAPLGV TAELGSLART GADSLGWLPQ RLEGLDGFSG CATMVKETLL
SNNGLFVIGL VIAAWASALA AGDFRPSSGA PRDWLRGLLG GVLLGWGSLL ALGCTVGTLL
SGVMAGAASG WVFGLFCLLG IVLGLKLRPL LRLG