| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4331 |
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| Symbol | |
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| ID | 5107105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4746641 |
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| End bp | 4747633 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505597 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001189810 |
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| Protein GI | 146309345 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.763545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA ATGCCTTGCG TGTTGGCCTG GCGGCGCTGT TCGCCGCCTG GTTGCCAGCC
GCCTTACATG CCGCACCACC GAAAGAAGTC CGCCTGGACT ACGCCTACTA CGCCCCCACC
AGCCTGGTGC TCAAGCAGCA GGGCTTGCTG GAAAAAGCCC TCGCGCCGCA GGGCATCGCC
GTCAAATGGG TATTCAGCCA GGGCAGCAAC CGCTCGCTGG AATACCTCAA CGGCGGTAGC
ACCGATTTCG CCTCCACTGC CGGCTTGGCC GCCGTGCTCA GCCGCGCCAA CGGCGCACCG
ATCAACACCG TCTACGTCGC CAGCCGCCCG GAGTGGACCG CGCTGGTGGT GCCCAAGGAC
TCGCCCGTCC AGTCGCTGGG CGACCTCAAG GGTAAAAAGG TCGCCGCCAC CAAGGGCACC
GACCCTTTCC TGTTCCTCCT GCAAAGCCTG CAGAAGGCCG GGCTGGACAA GAACGCCGTG
GAAATCGTCC ACCTGCAACA CCCGGACGGT CGCGTCGCCC TGGAGCGCGG CGACGTGCAG
GCCTGGGCCG GGCTCGACCC CCTGATGGCG GCCAGCGAGC TGCAGGCCGG TTCGCGCCTG
CTGTACCGCA ACCGCGACTT CAACAGCTAC AGCGTGCTCA GCGTCACCGA GACCTTCGCC
AAGCAGCAGC CCGAGCTGAT CAAGCAGGTG ATCGCCGCCT ACGAGCAGGC GCGCCAGTGG
GCCATCGCCA ACCCCGATGC CCTGGCCCAG TTGCTCGCCG ACGAAGCCAA GCTGCCGCTG
GAAGTGGCCA AGCTACAACT GTCGCGCACC GACTTCAGCA ACCCGCAGCC GGGCGCCGAG
CACATCAAGG CGCTGAAAGC CGCCGCACCC ATCCTGCTCG ACGAGCAACT GGTGCGTCCG
GGTACCGACG TCGCTCAGGT GGTCGACCAA CTGATCCAGC CGCAACTGGC CGCTCAGGTA
ATCGGCAGCA ACGTGGCCAA GGCGGGGAAC TGA
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| Protein sequence | MKKNALRVGL AALFAAWLPA ALHAAPPKEV RLDYAYYAPT SLVLKQQGLL EKALAPQGIA
VKWVFSQGSN RSLEYLNGGS TDFASTAGLA AVLSRANGAP INTVYVASRP EWTALVVPKD
SPVQSLGDLK GKKVAATKGT DPFLFLLQSL QKAGLDKNAV EIVHLQHPDG RVALERGDVQ
AWAGLDPLMA ASELQAGSRL LYRNRDFNSY SVLSVTETFA KQQPELIKQV IAAYEQARQW
AIANPDALAQ LLADEAKLPL EVAKLQLSRT DFSNPQPGAE HIKALKAAAP ILLDEQLVRP
GTDVAQVVDQ LIQPQLAAQV IGSNVAKAGN
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