| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4316 |
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| Symbol | |
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| ID | 5107090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4731079 |
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| End bp | 4731906 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505582 |
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| Product | sulfate ABC transporter, inner membrane subunit CysW |
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| Protein accession | YP_001189795 |
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| Protein GI | 146309330 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4208] ABC-type sulfate transport system, permease component |
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| TIGRFAM ID | [TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.356778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC CTCAAGGTTG GCGCCAATGG GCGCTGGTAA CGCTCGGTCT GACGCTGGTG
GCACTGGTGC TGCTGGTGCC GCTGGCGCTG ATCTTCAGCA AGGCCCTGGC CGGTGGTCTC
GATCTGCTGT GGAGCAACCT GAACGAAGAC TACATGCGCC ACGCCATCGG CCTGACCCTG
CTGGTGGCGG TGATCACCGT GCCGCTGAAC CTGTGCTTCG GCATCTGCCT GGCCTGGTGC
GTGACCCACT ACGACTTTCG CGGGCGCAAG CTGCTGACCA CCCTGATCGA CATTCCCTAC
GCGGTGTCGC CGGTGGTCGC CGGCCTCTGC TACCTGGTGG TCTACGGCCT GGAGAGCTTC
ATTGGCCGCT GGTTCTACGA TAACGGCATG CAGCTGATGT TCGCCTGGCC GGGCATCGTC
ATGGTCACGG TGTTCGTCAC CGCGCCCTAC GTGGCGCGCA TCCTGATTCC GGTGATGCAG
GCCCAGGGCC AGGACGAGGA AGTGGCCGCC ATGTGCCTGG GCGCCAGCGG CTGGCAGATC
TTCCGCCGCA TCACCCTGCC GAAGATCAAG TGGGCGCTGC TGTACGGCGT GGTGGTAACC
AATGCGCGGG CGGTGGGCGA GTTCGGCGCG GTATCGGTGG TGTCCGGCAG CATCATCAAC
CAGACCCTGA CCCTGCCGCT GCTGGTCGAT CAGCTCAACA ACGACTACAA GCCCGCTGCG
GCGTTCACCG CTGCCGGCCT GCTGGCGTGC ATGGCGCTGC TCACCCTGTT CCTGAAAACC
TTCATGGAGT GGCGTCAGCG CCAGCTGATG CAACGCGCCG AGGCCTGA
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| Protein sequence | MKKPQGWRQW ALVTLGLTLV ALVLLVPLAL IFSKALAGGL DLLWSNLNED YMRHAIGLTL
LVAVITVPLN LCFGICLAWC VTHYDFRGRK LLTTLIDIPY AVSPVVAGLC YLVVYGLESF
IGRWFYDNGM QLMFAWPGIV MVTVFVTAPY VARILIPVMQ AQGQDEEVAA MCLGASGWQI
FRRITLPKIK WALLYGVVVT NARAVGEFGA VSVVSGSIIN QTLTLPLLVD QLNNDYKPAA
AFTAAGLLAC MALLTLFLKT FMEWRQRQLM QRAEA
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