| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4307 |
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| Symbol | |
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| ID | 5107081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4714414 |
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| End bp | 4715397 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505573 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001189786 |
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| Protein GI | 146309321 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCTG TGATGGATGA TCAAGGCAAC GGTGTTTCTG AGCTGGAAGA ACTGACCCTG
GCCCTGCTGC ACAGCCGTGC CGAGGTGGAG CGGCTGCGAG AGCGCGAACA GCTGTTCAGC
AGCCTGCTCG GCAGCGTCAA CGCCGCGCTC TGGGCGTTCG ATTGGGATGA GCAGCGGGTG
ATCTACGTCA GCCCTGCCTA CGAACGCATT TTTGGCCGTT CCGCGGCCCT GCTGCTGGCC
GACTACGGAG AGTGGCGCAA CAGCATCTAC CCTGACGATC TCGATTACGC CGCCGAGAGC
CTGGCCAAGG TACTGGAAAC CGGCGCAGTG GAGTTTCGTG AGTACCGCAT CATCCGCTCC
GATGGCCAGT TGCGCTGGCT CAGCGACAAG TGCTTCGTCA GCCCGCGCTC GGCGGCAGGG
CAGGGGCACG TGATAGTCGG CATCGCCGAG GACATCACCG AGAAGAAGCG TCTGGAGGGC
GAGCTGCATC GTCTGGCCAC CACCGACGTG CTGACCCAGA GCAGCAACCG CCGGCACTTC
TTCGAATGTG CCCGCCGCGA ATTCGAGCAC GCGCGCAAGT TCGGCAGCCC GCTGGCCTTC
CTGCTGCTTG ATCTCGACGA CTTCAAGAAG ATCAACGACC AGTACGGTCA TCAGCTCGGT
GACCAGGTGC TGCAGCGTCT GGCGCAGTGC GGCGCCAACG CATTGCGTCG CGGCGACCTG
TTCGGTCGCA TCGGTGGCGA GGAGTTCGCT GCCCTGTTCC CCGGCTGCGA ACCGGATGTC
GCCCTGCAGG TAGCCGAGCG CTTGCAGCGC GAGGTGCAAC GCCTGAGCTT CCAGCATGAG
GGCGTCAGCT TCGGCATCAC CGTCAGTCAG GGGCTGACCA GCATGCGCGC TGCCGACGTC
AACCTCGACG CGCTCTATGC ACGCGCCGAT GCCGCGATGT ACCTGGCCAA GCGCCAGGGC
AAGAACCAGA TCGTCCTGGG CTGA
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| Protein sequence | MAAVMDDQGN GVSELEELTL ALLHSRAEVE RLREREQLFS SLLGSVNAAL WAFDWDEQRV
IYVSPAYERI FGRSAALLLA DYGEWRNSIY PDDLDYAAES LAKVLETGAV EFREYRIIRS
DGQLRWLSDK CFVSPRSAAG QGHVIVGIAE DITEKKRLEG ELHRLATTDV LTQSSNRRHF
FECARREFEH ARKFGSPLAF LLLDLDDFKK INDQYGHQLG DQVLQRLAQC GANALRRGDL
FGRIGGEEFA ALFPGCEPDV ALQVAERLQR EVQRLSFQHE GVSFGITVSQ GLTSMRAADV
NLDALYARAD AAMYLAKRQG KNQIVLG
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