Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4303 |
Symbol | |
ID | 5107077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4710559 |
End bp | 4711494 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640505569 |
Product | SPFH domain-containing protein/band 7 family protein |
Protein accession | YP_001189782 |
Protein GI | 146309317 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATCG GTGGCGTCCT GCTGCTGTTC GTCGGCCTGG CCGTGGCCAT CGTCTACATG GGGTTCAAGG TGGTGCCGCA GGGCTCGGAA TGGACGGTGG AGCGCTTCGG CCGCTATACC ACCACGCTCA AGCCCGGTCT CAACATCATC GTCCCGGTGA TGGACCGTAT CGGCCGCAAG CTCAACGTGA TGGAGAGCGT GCTCGATATC CCGCCGCAGG AGGTGATCAG CGCCGATAAC GCCATCGTGC AGATCGATGC GGTGTGCTTC TTCCAGGTGA TCAATGCGGC CCAGGCCGCC TACGAGGTCA ACGACCTGGA GCACGCCATC CGCAACCTGG TGATGACCAA CATCCGTACC GTGCTCGGCT CCATGGAGCT GGACGCCATG CTCAGCCAGC GCGATGCGAT CAACGAGCGT CTGCTCAAGA CCGTGGACGA AGCCACCGCC CCCTGGGGTA TCAAGATCAC CCGGATCGAG ATCAAGGACA TCAGCCCGCC CGCCGACCTG GTCGAGGCCA TGGCCAGCCA GATGAAGGCC GAACGCCTCA AGCGCGCACA GATTCTCGAA GCCGAAGGCT CGCGCTCGGC CGCCATCCTC ACCGCAGAGG GGCACAAGCA GGCGGAGATT CTCCGTGCCG AGGGCGAGCG CCAGGCCGCC TTCCTCGAAG CCGAGGCACG CGAGCGGGCA GCGCAGGCCG AAGCGGAGGC GACTCGCGTG GTATCCCAGG CCATTGCCGA AGGCAACGTG CAGGCGGTCA ATTATTTCGT CGCGCAGAAA TACGTCGAGG CGCTCGGGCA ACTGGCATCG GCCAACAACA GCAAGGTAGT GCTGATGCCG CTGGAGGCCA GCCAGGTGAT CGGCGCGGTG GGCGGCATCG GCGAAATCGT CAGGGCCACC TTCGGCGCCG ATGCTACAGG CGGGAAGCGG GGCTGA
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Protein sequence | MEIGGVLLLF VGLAVAIVYM GFKVVPQGSE WTVERFGRYT TTLKPGLNII VPVMDRIGRK LNVMESVLDI PPQEVISADN AIVQIDAVCF FQVINAAQAA YEVNDLEHAI RNLVMTNIRT VLGSMELDAM LSQRDAINER LLKTVDEATA PWGIKITRIE IKDISPPADL VEAMASQMKA ERLKRAQILE AEGSRSAAIL TAEGHKQAEI LRAEGERQAA FLEAEARERA AQAEAEATRV VSQAIAEGNV QAVNYFVAQK YVEALGQLAS ANNSKVVLMP LEASQVIGAV GGIGEIVRAT FGADATGGKR G
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