| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4294 |
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| Symbol | |
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| ID | 5107068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4701254 |
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| End bp | 4702639 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505560 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001189773 |
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| Protein GI | 146309308 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.595978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG ACAGCGCCAT CGACAGCCGC ATTCAGGTTC TGCTGATCGA CGACGATGCC
CACCTGCGCC AGGCGCTCAG CCAGACCCTC GACCTGGCCG GACTCAAGGT GCTCAGCCTG
GGCGATGCCC AGGGTCTGGC CCAGCGTATT CCGGCTGACT GGCCGGGCGT GGTGGTCAGC
GATATCCGCA TGCCCGGCAT CGACGGCCTG CAACTGCTGC AGCAACTGCG CGAGCGTGAC
ACCGAGCTGC CGGTGCTGCT GATCACCGGC CACGGTGATG TGCCGCTGGC GGTGCAGGCG
ATGCGCGCCG GTGCCTATGA CTTTCTGGAA AAGCCCTTCG CCAACGAGGC GCTGCTCGAC
AGCGTGCGCC GCGCCCTGGA ACTGCGCCGC CTGGTACTGG ACAACCGCAG CCTGCGCATG
GCGCTCAACG ACCGCCAGCA ACTGGCCGGG CGCCTGGTCG GCCAGTCGCC GGCAATGCAG
CGCCTGCGCG AGCAGATCGC CGCCCTGGCC GGCATCGCCA CCGACGTGCT GATCCTCGGC
GAGACCGGCG CTGGCAAGGA GGTGGTGGCG CGCGCCCTGC ACGATCTGTC CAGCCGCCGC
GACGGCCCCT TCGTCGCCAT CAACGCCGGT GCGCTGGCCG AATCGGTGGT GGAGAGCGAG
CTGTTCGGCC ACGAGGCAGG CGCCTTCACC GGCGCGCAGA AACGCAGAAT CGGCAAGTTC
GAGTTCGCCA ATGGCGGCAC CCTGTTCCTC GACGAGATCG AGAGCATGAG CCTGGACGTG
CAGGTCAAGC TGTTGCGCCT GCTGCAGGAG CGCGTGGTCG AACGCCTCGG CGGCAACCAG
TTGATCCCGC TGGATATCCG CGTGATCGCC GCGACCAAGG AAGACCTGCG CCAGGCCGCC
GATGCCGGGC GTTTCCGTGC CGACCTCTAC TACCGCCTCA ACGTCGCACC GCTGTCCATT
CCGCCGCTGC GCGAGCGCGG CGAGGACGCC CTGTTGCTGT TCCAGCACTT CGCCGAAAGC
GCCGCCGCCC GCCATGCACT GCCGCCGCGA GAGCTGCAGC CGGGCCAGCG CGCCCTGCTG
CTGCGTCACC CCTGGCCGGG TAACGTCCGC GAGCTGCAGA ACGCCGCCGA GCGCTTCGCG
CTTGGCCTGG AACTGGCGCT GGACAGCAAC GCACCGAACC TGCCGCCGGT CAACGGCGGC
CTCAGCGAGC AGGTCGAAGC CTTCGAGCGG GCGCTGATCG CCGCCGAGCT GAGCCGCCCG
CATGGCTCGC TGCGTAGCCT GGCCGAGGCG CTGGGAGTGC CGCGCAAGAC CCTGCACGAC
AAGCTGCGCA AGCACGGCCT GAATTTCTCC GGCGCTGGCG GAAGCTCGCC AGAGGATTTC
GACTGA
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| Protein sequence | MTSDSAIDSR IQVLLIDDDA HLRQALSQTL DLAGLKVLSL GDAQGLAQRI PADWPGVVVS
DIRMPGIDGL QLLQQLRERD TELPVLLITG HGDVPLAVQA MRAGAYDFLE KPFANEALLD
SVRRALELRR LVLDNRSLRM ALNDRQQLAG RLVGQSPAMQ RLREQIAALA GIATDVLILG
ETGAGKEVVA RALHDLSSRR DGPFVAINAG ALAESVVESE LFGHEAGAFT GAQKRRIGKF
EFANGGTLFL DEIESMSLDV QVKLLRLLQE RVVERLGGNQ LIPLDIRVIA ATKEDLRQAA
DAGRFRADLY YRLNVAPLSI PPLRERGEDA LLLFQHFAES AAARHALPPR ELQPGQRALL
LRHPWPGNVR ELQNAAERFA LGLELALDSN APNLPPVNGG LSEQVEAFER ALIAAELSRP
HGSLRSLAEA LGVPRKTLHD KLRKHGLNFS GAGGSSPEDF D
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