| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4292 |
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| Symbol | |
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| ID | 5107066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4698527 |
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| End bp | 4699390 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505558 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_001189771 |
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| Protein GI | 146309306 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.405671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC TTATCAGCGG CCACACCGGC CAGGTCGCGC GTGAATTGCA ACTGGCCCTG
CGCAAACACG AACTGGTCAG CCTGGGTCGT CAGGCATTCG ACCTGTCGCG CCCGGACAGT
CTGCGCGAAA CCATCCTGCG CGAGCGTCCC GCCCTGGTCA TCAACGCCGC CGCGTACACC
GCCGTCGATC AGGCCGAACA GGAGCGCGAG CTGGCCTTCA GCGTCAATGC CGAGGCACCG
GGCGTCATGG CCGATGCCTG CTTCGAGCTG GACATCCCGC TGATCCACTA CTCCACCGAC
TACGTCTTCG ACGGCAGCAA GGCCACACCC TACCGCGAGG CCGATACGCC ACACCCGCTG
GGCGTCTATG GCGCCAGCAA GGCGGCTGGC GAACAGGCGC TGCGCATCAG CGGTTGCGAC
CACCTGATCC TGCGCACCAG CTGGGTCTAC TCGCAGCACG GGCGCAACTT CCTGCTGACT
ATGCAGCGCC TGCTGCAGGA ACGCGAGGAG CTCAGCGTGG TGGACGATCA GATCGGCGCG
CCGACCTGGG CCGGCAGCAT CGCCAGCGCC ACCACCGAGC TGATCGACAA GTGGCAGCAG
GGTCGCCATC ACTGGGGCAC CTACCACCTG ACCTGCCAGG GCGAAACCAG CTGGTTCGGT
TTCGCCAGCG CCATCGCCGA GCGCCTGCGT GCGGCCGGCA AGCCCTGCGC CAGGCTGCGC
CCCATCCCCA GCAGCGAGTA CCCGACGCCG GCGCAGCGCC CGCTCAATTC GCGCCTGGAT
GGCGAGCGCC TGGAACAGGA ATGGCAAGTT CGTCTGCCGG ACTGGCGCGC GGCACTGGAC
GCCTGCCTGC AACGCATGAA CTGA
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| Protein sequence | MKILISGHTG QVARELQLAL RKHELVSLGR QAFDLSRPDS LRETILRERP ALVINAAAYT
AVDQAEQERE LAFSVNAEAP GVMADACFEL DIPLIHYSTD YVFDGSKATP YREADTPHPL
GVYGASKAAG EQALRISGCD HLILRTSWVY SQHGRNFLLT MQRLLQEREE LSVVDDQIGA
PTWAGSIASA TTELIDKWQQ GRHHWGTYHL TCQGETSWFG FASAIAERLR AAGKPCARLR
PIPSSEYPTP AQRPLNSRLD GERLEQEWQV RLPDWRAALD ACLQRMN
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