Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4291 |
Symbol | |
ID | 5107065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4697982 |
End bp | 4698530 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640505557 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_001189770 |
Protein GI | 146309305 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.288271 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAGTCA TCGCAACTGC ACTACCGGAA GTGCTGATTC TCGAACCCCA GGTATTCGGC GACGAGCGCG GCTTCTTCTA CGAAAGCTTC AACGCGCGGC GCTTTGCCGA AGCCACCGGG GTGAACCGCG AATTCGTCCA GGACAACCAC TCGCGCTCGG CGCGTGGGGT GCTGCGCGGC CTGCACTATC AGTTGCAGCA GGCCCAGGGC AAGCTGGTGC GGGCCAGCGC TGGCGAGGTC TATGACGTGG CGGTGGATGT GCGGCGCAGC TCGCCGAACT TCGGCAAATG GGTCGGCGTG CATCTGTCGG CCGAAAACAA GCGCCAGCTA TGGGTGCCGG AGGGTTTCGC CCATGGTTTT CTGGTGCTCA GCGAGTACGC CGAGTTCCTC TACAAGACCA CCGACTACTA CGCCCCCGCC CATGAGCGCT GCATCCGCTG GGATGATGCG CACCTGGCCA TCGACTGGCC GCTGGACGGA CTGACGCCGC AACTGTCGGC CAAGGACCAG CAGGGCCTGA GCCTGCAGGA CGCCGAGACA TTCGCATGA
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Protein sequence | MKVIATALPE VLILEPQVFG DERGFFYESF NARRFAEATG VNREFVQDNH SRSARGVLRG LHYQLQQAQG KLVRASAGEV YDVAVDVRRS SPNFGKWVGV HLSAENKRQL WVPEGFAHGF LVLSEYAEFL YKTTDYYAPA HERCIRWDDA HLAIDWPLDG LTPQLSAKDQ QGLSLQDAET FA
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