| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4287 |
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| Symbol | |
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| ID | 5107061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4692731 |
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| End bp | 4694188 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505553 |
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| Product | mannose-1-phosphate guanylyltransferase (GDP) |
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| Protein accession | YP_001189766 |
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| Protein GI | 146309301 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase |
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| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.197639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC TGATTCCCTG CATCGTTGCC GGTGGTGCCG GCACCCGCCT GTGGCCGGTA
TCGCGCGAGG CCATGCCCAA GCCTTTCATG CGTCTGGCCG ATGGTCTCAG CCTGCTACAG
AAGACCTTCG AGCGTGTCGC TGGCCTGGAT GATGTGACCA GGCTGCTGAC GGTGATCAAT
CGGGAGCTGC TGTTTCGCAC CCTGGACGAC TACCGGCCGC TGAATCGTGG GCGCCTGGGG
CTGGATTTTC TCCTCGAACC GATGGGGCGC AACACGGCAC CGGCGATTGC CGCGGCAGCG
CTGTACGCCG TTCGTCACTA CGGTGAGGAG GCGCAGTTGC TGGTGCTGCC GGCCGATCAC
CTGATTCGTG ATCAGCAGGC TTTCGTTTCC GCGGTGGCGC GTGCGCGCGA TCTGGCCAAG
GCGGGCTGGC TGGTCACCTT CGGCATCCGC CCCGGCCATG CGGAGACCGG TTATGGCTAT
ATCCAGCAGG GTGAAGCGTT GGAGGCCGGT GGGTATCGCG TAGCCAGTTT CGTCGAGAAG
CCCGACCTGC AGACCGCGCA GACGTATCTG GAGGGCGGCG AACATCTGTG GAACGCCGGC
ATGTTCTGTT TCCGCGCCGA CGTGCTGCTG CGCGAACTTC GCGAACATGC GCCGCAGGTC
GTCGAGGGCG TGGAGAGGTG CCTGGCACTG AGTGGGGCCG TCGAAGGCAA GCAGGGCAAG
CAGTGTGAGC TGGATGCGGC CAGTTTCGCC GAGGTAACGG ATATCTCCAT CGACTATGCC
CTCATGGAGC GTTCCTCCAG GGTGGCTGTC GTGCCTTGCG ACCTGGGTTG GAGCGACATT
GGCTCGTGGC AGGCGCTGCG CGAGCTGACG CCGGCGGATG CCAATGGCAA CCAGATCATA
GGTGAGGCGG TACTGCACAA CGTACAGGAC TGTTACATCG ATTCACCCAA GCGGCTGGTG
GGCGCCGTGG GCGTGCGTGA CCTGGTGGTG GTGGACACGC CAGACGCCCT GTTGATCGCC
GACGCGCGCA GCACCCAGGA CGTCAAGTTC ATCGCCCAGG AGTTGAAGAA GCGCGGCCAC
GAGGCCTATC GCCTGCACCG TACGGTGACT CGCCCGTGGG GCACCTACAC CGTGCTGGAG
GAGGGGGCGC GCTTCAAGAT CAAGCGCATC ATGGTCCGCC CCGGCGAATC GCTGTCGTTG
CAGATGCACC ACCATCGCAG CGAGCACTGG GTAGTGGTCA GCGGTATGGC CCGGGTGATG
AACGGCGAGC GCGACTTTTT GCTCAACACC AATGAGTCGA CCTTCATTCC CGCTGGGCAC
AGTCACCGCC TTGTAAATCC TGGGGTGATC GACCTGGTGA TGATCGAAGT GCAGAGCGGC
GAGTACCTCG GCGAAGATGA CATCGTGCGC TTCACCGATA TCTATGGCCG TGTGCCGGTG
GCCGAGACGC TTAGCTGA
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| Protein sequence | MSTLIPCIVA GGAGTRLWPV SREAMPKPFM RLADGLSLLQ KTFERVAGLD DVTRLLTVIN
RELLFRTLDD YRPLNRGRLG LDFLLEPMGR NTAPAIAAAA LYAVRHYGEE AQLLVLPADH
LIRDQQAFVS AVARARDLAK AGWLVTFGIR PGHAETGYGY IQQGEALEAG GYRVASFVEK
PDLQTAQTYL EGGEHLWNAG MFCFRADVLL RELREHAPQV VEGVERCLAL SGAVEGKQGK
QCELDAASFA EVTDISIDYA LMERSSRVAV VPCDLGWSDI GSWQALRELT PADANGNQII
GEAVLHNVQD CYIDSPKRLV GAVGVRDLVV VDTPDALLIA DARSTQDVKF IAQELKKRGH
EAYRLHRTVT RPWGTYTVLE EGARFKIKRI MVRPGESLSL QMHHHRSEHW VVVSGMARVM
NGERDFLLNT NESTFIPAGH SHRLVNPGVI DLVMIEVQSG EYLGEDDIVR FTDIYGRVPV
AETLS
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