| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4282 |
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| Symbol | |
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| ID | 5107056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4686494 |
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| End bp | 4687828 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505548 |
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| Product | Beta-xylosidase-like protein |
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| Protein accession | YP_001189761 |
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| Protein GI | 146309296 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3664] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.296007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.00752766 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGGCGTA GAACTGTTTT CCTGCTCCCC GCGGTGCTCG TGCTTGGCGT CGTCCTTCTG
ACCCTGCCCT GGAGCCGCCA GGCCGAGGCC GAGGTGACCA CGCTGAAGGC GCCGGGGCCC
CTGGTATGGC GCGACTTCCT TGGCGTCAAC GCGCAGTTCC ACTTCTTCGA GCCCGCCATC
TATCAGGCGC AGATGCAGCA GTTGAACGAG CTGGGCCTGG AGTGGGTGCG AATCGCCATG
CACTGGGCGT ACCTCGAGCC GCAGCGCGGG CAGTTCAACC TGACCGCCTT CGACCCCATG
GTCGAGGCCA TGCAGCAGCA TCAGCTGAAA CCGGTTGGCT TTCTGGTCGG GTCGGCGCCT
TTCGCCACCA CCGCTCCGGC CGATTCCCCC TATCAGGATT CCTTCCCGCC CAAGGACAAT
GCCCTGTACG GCGAGAGCCT GGTGCGCTTG GCCAAGCACT ACGATGCCTT CGCGGCCTGG
CAGATCTGGA ACGAGCCGAA CATCTTTCCT TTCTGGCGGC CCAAGGAAGA CCCGCAGGCT
TACGCCAAAC TGCTGTTCCA GAGCGCCGAT GCCCTGCGCG CCCATGTCCC CGGCAAGACC
GTGGTGGCGG GGGGCATGGC CTATTACAGC AACATGCCCT CGCATGGCGG CGCGCTGATG
CTGCAATCCC TGCTGCAGAT GGGGGTGGCG CAGAAGAAGC TGGTTATGGC CTACCACCCC
TACACCGAAC TGCCCGAGGG CGCCTCGCCC AAGCAGCAGG ACTATCTGCA GCACTCCAAC
TTCATCAACA GCGCCCTGCG GGCCCACGGT ATCGAGCAGA TCTGGGCGAC CGAGTGGGGC
TGGTCCAGTT ACAGCGGGCC CAAGGAAATG CAGGCCATCA TCGGCGTCGA CGGGCAGGCG
GACTATACGT TGCGCCGACT GGCGCTGATG AGCGCGCAGG ATTTCGACCG CATCTTCCTG
TTCAATCTCA GCGATCTCGA TAGCCGCGCC GGCCCGCGTG ACCAGGGCTA TGGCCTGCTC
GATCTGCAGG CGCGACCCAA GCCGGTGTAC AACGCCCTGG CGAACCTGCT CAAGGTCACC
GGTCCGCGCC TGGAGCCGAG CGACGCCCCG CGTTTCGAGC AGGCGCCAAA TGACCTGTAC
AACGTCACCT GGACTCGCCA GGACGGCAGC CACGTGTGGA TGTTCTGGAG TGCCAGCGGC
AAGCAGCTCC GCCTTCCGGC GGTGCAGCGC GCCACCCTGC ACGATCCGCT CACCGGAGAA
CAGCGCGAGC TGCAAGGTGG CGAGGGTGTG GTGGTGCCGC TCAAGTCCAG TCTGCAACTG
CTGGTCTGGC GTTAG
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| Protein sequence | MWRRTVFLLP AVLVLGVVLL TLPWSRQAEA EVTTLKAPGP LVWRDFLGVN AQFHFFEPAI
YQAQMQQLNE LGLEWVRIAM HWAYLEPQRG QFNLTAFDPM VEAMQQHQLK PVGFLVGSAP
FATTAPADSP YQDSFPPKDN ALYGESLVRL AKHYDAFAAW QIWNEPNIFP FWRPKEDPQA
YAKLLFQSAD ALRAHVPGKT VVAGGMAYYS NMPSHGGALM LQSLLQMGVA QKKLVMAYHP
YTELPEGASP KQQDYLQHSN FINSALRAHG IEQIWATEWG WSSYSGPKEM QAIIGVDGQA
DYTLRRLALM SAQDFDRIFL FNLSDLDSRA GPRDQGYGLL DLQARPKPVY NALANLLKVT
GPRLEPSDAP RFEQAPNDLY NVTWTRQDGS HVWMFWSASG KQLRLPAVQR ATLHDPLTGE
QRELQGGEGV VVPLKSSLQL LVWR
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