Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4268 |
Symbol | |
ID | 5107042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 4672374 |
End bp | 4672745 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640505533 |
Product | hypothetical protein |
Protein accession | YP_001189747 |
Protein GI | 146309282 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0172715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 5.4878e-16 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAGCCTG AGAGCCTCTT ACTGCGTCAG ATTCATCCGA GTTTTGTTCA AGAAGGCAGG GTCACTTCAC AAGCTTTTCG CCCAACCCCA AAGGATGAAT TTCATCTTTC GGTCGACAAT GGTGACAAGA GCTCCGCGAA AGACGCTTGG CAGCGCTTCA TAAACACCCC CGGATGCTCG TCTATCGGCG TTCAAGCAGT CCGAGCCGCT GACTGTGAAG AGCAAGAACT ACCGGTAATA GAAGATGGCA CGCCCTATCC AGAGCATTGC TCAATCGACT TTTCAGCTGA GCAGAAGAAA AGCATTGAGC GCAAGGCAAA GGCACTCCGA ACTAAGGCGG AGTCGATAGG ATGGCTGCAC CTAGTAGATT AG
|
Protein sequence | MKPESLLLRQ IHPSFVQEGR VTSQAFRPTP KDEFHLSVDN GDKSSAKDAW QRFINTPGCS SIGVQAVRAA DCEEQELPVI EDGTPYPEHC SIDFSAEQKK SIERKAKALR TKAESIGWLH LVD
|
| |