| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4259 |
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| Symbol | |
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| ID | 5107033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4663324 |
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| End bp | 4664391 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640505523 |
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| Product | A/G-specific DNA-adenine glycosylase |
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| Protein accession | YP_001189738 |
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| Protein GI | 146309273 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000000489397 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCCCG AGCAGTTCAA CAGCGCCGTG CTGGCCTGGT ATGACCAGCA CGGGCGCAAG
GATCTGCCCT GGCAGCAGAA CATCACCCCG TATCGTGTCT GGGTTTCGGA AATCATGCTG
CAGCAGACCC AGGTCAGCAC CGTGCTCGGC TACTTCGATC GCTTTATGGC CGCACTGCCG
ACCGTGAAGG ACCTGGCCGA AGCGCCCGAG GATGAAGTAC TGCACCTGTG GACCGGCCTG
GGCTACTACA CCCGCGCGCG CAACCTGCAG AAGAGCGCGC AGATCATCAT GCGCGAGCAC
GGCGGCGAGT TCCCCCGCAG CGTCGAGGCG CTGGCCGAGC TGCCCGGCAT CGGCCGCTCC
ACCGCCGGCG CCATCGCCAG CCTGAGCATG GGCGTGCGTG CGCCGATCCT CGACGGCAAC
GTCAAACGCG TACTCGCGCG CTACGTGGCG CAGGAGGGCT ATCCCGGCGA GCCGAAGGTG
GCCAAGCAGT TGTGGGACAT CGCCGAGCGC CTCACGCCGC ACGAACGGGT CGGCCACTAC
ACCCAGGCGA TGATGGACCT CGGCGCCACC CTCTGCACCC GCAGCAAACC CACCTGCCTG
CTGTGCCCGG TGCGCAGCGG CTGCCAGGCG CATCTGCTCG GCCTGGAAAT CCGCTACCCG
GTGCCCAAGC CGCGCAAGAC GCTGCCGCAG AAGCGCACCC TGATGCCGCT GCTGGTCAAC
GCCTCTGGCG ACATCCTGCT CTATCGCCGC CCCTCCACCG GGCTGTGGGG TGGGCTGTGG
AGCCTGCCGG AACTGGACGA TCTCGGGCAG CTCGCAGACC TCGGCCAGCA GCAACAGCTC
GAGCTTGGCG AGCGCCAAGA GCTGGAAGGC CTGACCCACA CCTTCAGCCA CTTCCAGCTG
GCCATCGAAC CCTGGCTGGT GCGGGTGACC GAGCAGCCGA GCCGCGTGGC CGAGGGCGAC
TGGCTCTGGT ATAACCTCGC CACCCCGCCG CGCCTGGGCC TCGCCGCCCC GGTGAAGAAG
TTGCTCAAAC GCGCGGCGCA AGCCATTACC GCTGGAGAAC CGACATGA
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| Protein sequence | MSPEQFNSAV LAWYDQHGRK DLPWQQNITP YRVWVSEIML QQTQVSTVLG YFDRFMAALP
TVKDLAEAPE DEVLHLWTGL GYYTRARNLQ KSAQIIMREH GGEFPRSVEA LAELPGIGRS
TAGAIASLSM GVRAPILDGN VKRVLARYVA QEGYPGEPKV AKQLWDIAER LTPHERVGHY
TQAMMDLGAT LCTRSKPTCL LCPVRSGCQA HLLGLEIRYP VPKPRKTLPQ KRTLMPLLVN
ASGDILLYRR PSTGLWGGLW SLPELDDLGQ LADLGQQQQL ELGERQELEG LTHTFSHFQL
AIEPWLVRVT EQPSRVAEGD WLWYNLATPP RLGLAAPVKK LLKRAAQAIT AGEPT
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